[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: norris & sj)

EMDB-57178:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57179:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2, UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57180:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57298:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57299:
CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57301:
CUL1 C-term, RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57302:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57303:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57304:
CUL1-C-terminus-RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57305:
SKP1-CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57306:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57308:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57309:
CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57310:
CUL1 C-term, RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57311:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-23199:
Generation of ordered protein assemblies using rigid three-body fusion
Method: single particle / : Yao Q, Vulovic I, Baker D, Jensen G

EMDB-23531:
D3-19.19
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23532:
D3-19.14
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23533:
D3-1.5C
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23534:
Designed oligomer D2-1.1B
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23535:
Designed oligomer D2-1.4H
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23536:
Designed oligomer D2-1.1D
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23537:
DARPin 21.8.HSA-C9.v2 with HSA complex
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-23538:
DARPin HAS local refinement
Method: single particle / : Park YJ, Ivan V, Baker D, Veesler D

EMDB-21884:
Local refined structure of stator and C-ring interaction region in clockwise rotating delta-cheY3 Borrelia flagellar motor
Method: subtomogram averaging / : Chang YJ, Liu J

EMDB-21885:
Local refined stator-rotor interaction region in delta-cheX Borrelia flagellar motor
Method: subtomogram averaging / : Chang YJ, Liu J

EMDB-21886:
Local refined structure of stator and C-ring interaction region in counter-clockwise rotating delta-cheY3 Borrelia flagellar motor
Method: subtomogram averaging / : Chang YJ, Liu J

EMDB-0534:
Asymmetric reconstruction of the in situ flagellar motor structure in Borrelia burgdorferi
Method: subtomogram averaging / : Liu J, Chang YJ

EMDB-0536:
Local refinement of stator-rotor interaction region in flagellar motor of wild type Borrelia burgdorferi
Method: subtomogram averaging / : Liu J, Chang YJ

EMDB-0537:
cryo-ET flagellar motor structure of motB deletion Borrelia burgdorferi
Method: subtomogram averaging / : Liu J, Chang YJ

EMDB-0538:
Local refinement for the in-situ flagellar motor structure of motB deletion Borrelia burgdorferi
Method: subtomogram averaging / : Liu J, Chang YJ

EMDB-9122:
Flagellar motor averaged map from Borrelia burdorferi reveals the cytoplasmic ATPase complex
Method: subtomogram averaging / : Qin Z, Liu J

EMDB-9123:
Flagellar motor averaged map from Borrelia burdorferi reveals the cytoplasmic ATPase complex
Method: subtomogram averaging / : Qin Z, Liu J

EMDB-6088:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6089:
Flagellar motor mutant from Borrelia burgdorferi (FlhB mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6090:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FliZ mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6091:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FliP mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6092:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FliQ mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6093:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FliR mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6094:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FlhA, FlhB, FliP, FliQ and FliR deletion mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6095:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FlgE mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6096:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FlgG mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6097:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FlhO mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-6098:
Electron cryo-tomography of flagellar motor from Borrelia burgdorferi (FliE mutant)
Method: subtomogram averaging / : Tu JG, Zhao XW, Manne A, Lees K, Yerke A, Zhang K, Li CH, Norris SJ, Motaleb MA, Liu J

EMDB-5912:
Cryo-electron tomography map of Leptospira interrogans flagellar motor
Method: subtomogram averaging / : Zhao XW, Norris SJ, Liu J

EMDB-5913:
Cryo-electron tomography map of Leptospira interrogans flagellar motor with 16-fold symmetry imposed
Method: subtomogram averaging / : Zhao XW, Norris SJ, Liu J

EMDB-5914:
Flagellar motor of Leptospira interrogans reconstructed by asymmetric reconstruction method
Method: subtomogram averaging / : Zhao XW, Norris SJ, Liu J

EMDB-5627:
Cryo-electron tomography of in situ flagellar motor of Borrelia burgdorferi
Method: subtomogram averaging / : Zhao X, Zhang K, Boquoi T, Hu B, Motaleb MA, Miller KA, James ME, Charon NW, Manson MD, Norris SJ, Li C, Liu J

EMDB-5628:
Cryo-electron tomography of in situ flagellar motor of Borrelia burgdorferi FliE mutant
Method: subtomogram averaging / : Zhao X, Zhang K, Boquoi T, Hu B, Motaleb MA, Miller KA, James ME, Charon NW, Manson MD, Norris SJ, Li C, Liu J

EMDB-5629:
Cryo-electron tomography of in situ flagellar motor of Borrelia burgdorferi FlgB mutant
Method: subtomogram averaging / : Zhao X, Zhang K, Boquoi T, Hu B, Motaleb MA, Miller KA, James ME, Charon NW, Manson MD, Norris SJ, Li C, Liu J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more