[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 852 items for (author: ng & ml)

EMDB-82115:
In Situ Subtomogram Average of the 80S Ribosome in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82118:
In Situ Subtomogram Average of the 60S Ribosomal Subunit in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82119:
In Situ Subtomogram Average of the Free 60S Ribosomal Subunit in the Soma of Rat Hippocampal Neuron
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82120:
In Situ Subtomogram Average of the 80S Ribosome in the Soma of Rat Hippocampal Neurons
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-71429:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71430:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71431:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71432:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71433:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71434:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71908:
QS 70S ribosome purified from FN200 cells
Method: single particle / : Ortega J, Arpin D

EMDB-72972:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-55320:
Stimulator of interferon genes protein
Method: single particle / : Xu P, Zhang B, Meng Y, Ablasser A

EMDB-55324:
Stimulator of interferon genes protein mutant - I165H
Method: single particle / : Xu P, Zhang B, Meng Y, Ablasser A

EMDB-55325:
Stimulator of interferon genes protein mutant - W119K M120K
Method: single particle / : Xu P, Zhang B, Meng Y, Ablasser A

EMDB-55326:
Stimulator of interferon genes protein mutant - D319K D320K
Method: single particle / : Xu P, Zhang B, Meng Y, Ablasser A

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72973:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72985:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72986:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72987:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72988:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72989:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72990:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72991:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72992:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72993:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72994:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-71307:
N49P7-FR Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-71308:
eN49P7-FRv1-23 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73991:
Cryo-EM structure of human apo mTORC2
Method: single particle / : Wranik M, Lee JM, Rogala KB

EMDB-73992:
mTORC2 in complex with Akt1
Method: single particle / : Wranik M, Lee JM, Rogala KB

EMDB-65107:
Raw consensus map of Type II-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65108:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65109:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-70595:
Structure of wild-type human TRPC3
Method: single particle / : Bell B, Baker ML, Cordero-Morales JF

EMDB-70596:
Structure of human TRPC3 T573A mutant
Method: single particle / : Bell B, Baker ML, Cordero-Morales JF

EMDB-70597:
Structure of human TRPC3 cerebellar splice variant (isoform c)
Method: single particle / : Bell B, Baker ML, Cordero-Morales JF

EMDB-70601:
Structure of a constitutively open human TRPC3 mutant in the inhibited state
Method: single particle / : Bell B, Baker ML, Cordero-Morales JF

EMDB-70724:
Structure of a constitutively open human TRPC3 mutant
Method: single particle / : Bell B, Baker ML, Cordero-Morales JF

EMDB-75195:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-75196:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-52411:
Inward-open structure of human glycine transporter 2 in substrate-free state
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

EMDB-75514:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more