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TitleIdentification of broadly inhibitory anti-PfEMP1 antibodies by mass spectrometry sequencing of plasma IgG from a malaria-exposed child.
Journal, issue, pagesProc Natl Acad Sci U S A, Vol. 122, Issue 34, Page e2508744122, Year 2025
Publish dateAug 26, 2025
AuthorsLouise Turner / Teresa Nunez de Villavicencio Diaz / Sai Sundar Rajan Raghavan / Ikhlaq Hussain Kana / Eric Lyimo / Chelsea Reitzel / Christian W Wang / Ewen Berube / Rasmus W Jensen / Johannes R Loeffler / Monica Lisa Fernández-Quintero / Thor G Theander / John P A Lusingu / Thierry Le Bihan / Xiaobing Han / Daniel T R Minja / Andrew B Ward / Bin Ma / Thomas Lavstsen /
PubMed Abstract pathology is driven by the accumulation of parasite-infected erythrocytes in blood capillaries. This sequestration process is mediated by the parasite's erythrocyte membrane protein 1 (PfEMP1) ... pathology is driven by the accumulation of parasite-infected erythrocytes in blood capillaries. This sequestration process is mediated by the parasite's erythrocyte membrane protein 1 (PfEMP1) adhesins, which bind select endothelial cell receptors. A subset of PfEMP1 binding human endothelial protein C receptor (EPCR) through their cysteine-rich interdomain region alpha 1 (CIDRα1) domains drives the pathogenesis to severe malaria. Despite high sequence diversity among CIDRα1 domains, individuals living in malaria-endemic regions become immune to severe disease in part through acquisition of antibodies inhibiting the PfEMP1-EPCR interaction. Here, we demonstrate an approach to identify pathogen-specific human monoclonal antibodies from plasma, combining mass spectrometry analysis of antigen-purified polyclonal plasma IgG and Ig transcript sequencing. We identified a clonal family of broadly reactive and EPCR binding-inhibitory human monoclonal antibodies against CIDRα1. The antibodies, isolated from a 9-y-old child, exhibited potent inhibition of EPCR binding broadly across CIDRα1 domains as well as binding of infected erythrocytes to EPCR. Structural analysis of one antibody variant complexed with CIDRα1 revealed a shared epitope of the clonal antibody family overlapping the EPCR binding site and the epitopes of two previously identified monoclonal antibodies, C7 and C74, with similar functional patterns. However, although C7, C74, and 110-3 antibodies all depend on the same few residues conserved in CIDRα1 to retain EPCR binding, the 110-3 antibodies contact additional variable residues, reducing their breadth of reactivity across the CIDRα1 family. These data bolster the hypothesis that broadly inhibitory antibodies against severe malaria-associated PfEMP1 target similar epitopes and are commonly developed in malaria-exposed individuals.
External linksProc Natl Acad Sci U S A / PubMed:40833410 / PubMed Central
MethodsEM (single particle)
Resolution3.4 Å
Structure data

EMDB-49201, PDB-9naq:
Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1
Method: EM (single particle) / Resolution: 3.4 Å

Source
  • homo sapiens (human)
  • plasmodium falciparum (malaria parasite P. falciparum)
KeywordsIMMUNE SYSTEM / Serum antibody / Cryo-EM / Monoclonal antibody / PfEMP1 / Malaria

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