[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,481 items for (author: mu & h)

EMDB-80331:
Structure of MurA in complex with ligand-bound LpxC
Method: single particle / : Yeo JY, Yan XF, Gao YG

EMDB-80332:
Peptidoglycan and lipopolysaccharide biosynthesis enzymes with inhibitor
Method: single particle / : Yeo JY, Yan XF, Gao YG

PDB-25rv:
Structure of MurA in complex with ligand-bound LpxC
Method: single particle / : Yeo JY, Yan XF, Gao YG

PDB-25rw:
Peptidoglycan and lipopolysaccharide biosynthesis enzymes with inhibitor
Method: single particle / : Yeo JY, Yan XF, Gao YG

EMDB-74098:
Conserved mRNP remodeling mechanism of the TREX-2L (Thp3/Csn12/Sem1) complex
Method: single particle / : Angelos AE, Clarke BP, Xie Y, Ren Y

PDB-9zeb:
Cryo-EM structure of the TREX-2.1 complex (Thp3/Csn12/Sem1) bound to the DEAD-box ATPase Sub2
Method: single particle / : Angelos AE, Clarke BP, Xie Y, Ren Y

EMDB-65307:
Structure of Cdr1 with Tacrolimus
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65308:
Structure of Cdr1 with curcumin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65309:
Structure of Cdr1 with beauvericin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65311:
Structure of Cdr1 with Fluconazole at the near site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65312:
Structure of Cdr1 with ATP/ADP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65313:
Structure of Cdr1 with Fluconazole at the middle site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65335:
Structure of Cdr1 with AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65336:
Structure of Cdr1 with AMPPNP and the far site Fluconazole
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65337:
Structure of Cdr1 with AMPPNP/AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-68246:
Structure of apo Cdr1
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-22fr:
Structure of apo Cdr1
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsu:
Structure of Cdr1 with Tacrolimus
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsv:
Structure of Cdr1 with curcumin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsw:
Structure of Cdr1 with beauvericin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsz:
Structure of Cdr1 with Fluconazole at the near site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vt1:
Structure of Cdr1 with ATP/ADP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vt2:
Structure of Cdr1 with Fluconazole at the middle site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vtm:
Structure of Cdr1 with AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vtn:
Structure of Cdr1 with AMPPNP and the far site Fluconazole
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vto:
Structure of Cdr1 with AMPPNP/AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-56939:
DIT2 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

EMDB-67122:
ZnT10 tetramer with zinc
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

EMDB-67133:
ZnT10 dimer with zinc
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

EMDB-67134:
ZnT10 dimer with manganese
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

EMDB-67135:
ZnT10 tetramer with manganese
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

PDB-9xqu:
ZnT10 tetramer with zinc
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

PDB-9xr3:
ZnT10 dimer with zinc
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

PDB-9xr4:
ZnT10 dimer with manganese
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

PDB-9xr5:
ZnT10 tetramer with manganese
Method: single particle / : Mu H, Yang C, Feng R, Wang Y, Song D, Yu H, Chi X

EMDB-55046:
Cryo-EM reconstruction of the RUVBL1-RUVBL2-CCDC103 (R2C) complex
Method: single particle / : Munoz-Hernandez H, Wieczorek M, Pal M

PDB-9sn2:
Cryo-EM reconstruction of the RUVBL1-RUVBL2-CCDC103 (R2C) complex
Method: single particle / : Munoz-Hernandez H, Wieczorek M, Pal M

EMDB-59180:
Structure of ZNFX1 in the ATP-bound, pre-ATP hydrolysis state
Method: single particle / : Yip MCJ, Naydenova K, Randow F

EMDB-59181:
Structure of ZNFX1 bound to RNA
Method: single particle / : Yip MCJ, Naydenova K, Randow F

EMDB-59182:
Structure of ZNFX1 in the post-ATP hydrolysis state
Method: single particle / : Heatley A, Naydenova K, Yip M, Randow F

EMDB-59183:
Helical polymer of human ZNFX1 proteins
Method: single particle / : Leigh KE, Harper CM, Naydenova K, Modis Y, Randow F

EMDB-59184:
Structure of the human ZNFX1 protein in a bundled sheet of twisted fibrils
Method: single particle / : Yip MCJ, Naydenova K, Randow F

EMDB-66405:
PmCas12m-crRNA-target DNA complex
Method: single particle / : Meng J, Tao Y

PDB-9wzr:
PmCas12m-crRNA-target DNA complex
Method: single particle / : Meng J, Tao Y

EMDB-76084:
GluA2-STZ apo state (full-length composite)
Method: single particle / : Gangwar SP, Newton TP, Yen LY, Sobolevsky AI

EMDB-76085:
GluA2-STZ desensitized state with partial agonist FW at 25 degrees C (full-length composite)
Method: single particle / : Newton TP, Yen LY, Gangwar SP, Sobolevsky AI

EMDB-76086:
GluA2-STZ open state with partial agonist FW at 25 degrees C (full-length composite)
Method: single particle / : Newton TP, Yen LY, Gangwar SP, Sobolevsky AI

EMDB-76087:
GluA2-STZ open state with partial agonist IW at 25 degrees C (full-length composite)
Method: single particle / : Newton TP, Yen LY, Gangwar SP, Sobolevsky AI

EMDB-76088:
GluA2-STZ pre-active state with partial agonist kainic acid (KA) at 25 degrees C (full-length composite)
Method: single particle / : Newton TP, Yen LY, Gangwar SP, Sobolevsky AI

EMDB-76089:
GluA2-STZ desensitized state with partial agonist NOW at 25 degrees C (full-length composite)
Method: single particle / : Newton TP, Yen LY, Gangwar SP, Sobolevsky AI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more