[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 107 items for (author: miranda & r)

EMDB-47577:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV NTD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47580:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47583:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47584:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47585:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47586:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47587:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47588:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47589:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47592:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-42917:
De novo designed KWOCA 18 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42919:
De novo designed KWOCA 18 nanoparticle - Assembly in D5 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42921:
De novo designed KWOCA 70 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42924:
De novo designed KWOCA 70 nanoparticle - Assembly in D3 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-41244:
Cryo-EM structure of BG505 SOSIP trimer purified via Galanthus nivalis lectin chromatography
Method: single particle / : Parsons RJ, Pothula K, Acharya P

EMDB-41246:
Cryo-EM structure of 1059 SOSIP trimer purified via Galanthus nivalis lectin chromatography
Method: single particle / : Parsons RJ, Pothula K, Acharya P

PDB-8tgu:
Cryo-EM structure of BG505 SOSIP trimer purified via Galanthus nivalis lectin chromatography
Method: single particle / : Parsons RJ, Pothula K, Acharya P

PDB-8tgw:
Cryo-EM structure of 1059 SOSIP trimer purified via Galanthus nivalis lectin chromatography
Method: single particle / : Parsons RJ, Pothula K, Acharya P

EMDB-28966:
CryoEM map of de novo designed oligomeric protein C4-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28967:
CryoEM map of de novo designed oligomeric protein C4-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28968:
CryoEM map of de novo designed oligomeric protein C6-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28969:
CryoEM map of de novo designed oligomeric protein C6-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28970:
CryoEM map of de novo designed oligomeric protein C6-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28971:
CryoEM map of de novo designed oligomeric protein C8-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28972:
CryoEM map of de novo designed oligomeric protein C8-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28973:
CryoEM map of de novo designed oligomeric protein C4-81
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28974:
CryoEM map of designed oligomeric protein C4-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-29602:
Three component pH responsive antibody octahedra escape lysosomal degradation
Method: single particle / : Borst AJ, Baker D

EMDB-28958:
CryoEM structure of designed modular protein oligomer C4-131
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-28888:
CryoEM structure of designed modular protein oligomer C8-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-28889:
CryoEM structure of designed modular protein oligomer C6-79
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

PDB-8f6q:
CryoEM structure of designed modular protein oligomer C8-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

PDB-8f6r:
CryoEM structure of designed modular protein oligomer C6-79
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-40969:
Uncrosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

EMDB-40970:
DSBU crosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

PDB-8t1j:
Uncrosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

PDB-8t1k:
DSBU crosslinked nNOS-CaM oxygenase homodimer
Method: single particle / : Lee K, Pospiech TH, Southworth D

EMDB-27031:
Accurate computational design of genetically encoded 3D protein crystals
Method: single particle / : Li Z, Borst AJ, Baker D

EMDB-40926:
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Method: single particle / : Weidle C, Borst A

PDB-8cwy:
Accurate computational design of genetically encoded 3D protein crystals
Method: single particle / : Li Z, Borst AJ, Baker D

PDB-8szz:
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Method: single particle / : Weidle C, Borst A

EMDB-41153:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-41154:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcf:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcg:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-29680:
C6HR1_8r: Extendable repeat protein heptamer
Method: single particle / : Bethel NP, Borst AJ

EMDB-29847:
C3HR3_8r: Extendable repeat protein trimer
Method: single particle / : Bethel NP, Borst AJ

EMDB-29849:
C6HR1_4r: Extendable repeat protein hexamer
Method: single particle / : Bethel NP, Borst AJ

EMDB-29851:
C4HR1_8r_shift5: Extendable repeat protein fiber
Method: helical / : Bethel NP, Borst AJ

EMDB-29856:
C3HR3_9r_shift4: Extendable repeat protein fiber
Method: helical / : Bethel NP, Borst AJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more