[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 22 items for (author: major & b)

EMDB-26855:
Arabidopsis DDM1 bound to nucleosome (H2A.W, H2B, H3.3, H4, with 147 bp DNA)
Method: single particle / : Ipsaro JJ, Adams DW, Joshua-Tor L

PDB-7ux9:
Arabidopsis DDM1 bound to nucleosome (H2A.W, H2B, H3.3, H4, with 147 bp DNA)
Method: single particle / : Ipsaro JJ, Adams DW, Joshua-Tor L

EMDB-11852:
Bovine Papillomavirus E1 DNA helicase-replication fork complex
Method: single particle / : Javed A, Major B

PDB-7apd:
Bovine Papillomavirus E1 DNA helicase-replication fork complex
Method: single particle / : Javed A, Major B, Stead J, Sanders CM, Orlova EV

EMDB-21314:
Cryo-EM structure of microtubule-bound KLP61F motor domain in the AMPPNP state
Method: helical / : Bodrug T, Wilson-Kubalek EM

EMDB-21315:
Cryo-EM structure of microtubule-bound KLP61F motor with tail domain in the nucleotide-free state
Method: helical / : Bodrug T, Wilson-Kubalek EM

PDB-6vpo:
Cryo-EM structure of microtubule-bound KLP61F motor domain in the AMPPNP state
Method: helical / : Bodrug T, Wilson-Kubalek EM, Nithianantham S, Debs G, Sindelar CV, Milligan R, Al-Bassam J

PDB-6vpp:
Cryo-EM structure of microtubule-bound KLP61F motor with tail domain in the nucleotide-free state
Method: helical / : Bodrug T, Wilson-Kubalek EM, Nithianantham S, Debs G, Sindelar CV, Milligan R, Al-Bassam J

EMDB-2077:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in AMPPNP state.
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar C, Rosenfeld S, Moores C

EMDB-2078:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in rigor state
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Major J, Rosenfeld SS, Moores CA

EMDB-2079:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in rigor state (gold cluster in loop5 T126C).
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Major J, Rosenfeld SS, Moores CA

EMDB-2080:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in rigor state (gold cluster in the neck linker V365C).
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Major J, Rosenfeld SS, Moores CA

EMDB-2081:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in the AMPPNP state (gold cluster in the neck linker V365C).
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Major J, Rosenfeld SS, Moores CA

EMDB-2152:
Electron cryo-microscopy of microtubule-bound human kinesin-5 motor domain in the AMPPNP state (gold cluster in the loop5 T126C).
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Major J, Rosenfeld SS, Moores CA

PDB-4aqv:
Model of human kinesin-5 motor domain (3HQD) and mammalian tubulin heterodimer (1JFF) docked into the 9.7-angstrom cryo-EM map of microtubule-bound kinesin-5 motor domain in the AMPPPNP state.
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Rosenfeld SS, Moores CA

PDB-4aqw:
Model of human kinesin-5 motor domain (1II6, 3HQD) and mammalian tubulin heterodimer (1JFF) docked into the 9.5-angstrom cryo-EM map of microtubule-bound kinesin-5 motor domain in the rigor state.
Method: single particle / : Goulet A, Behnke-Parks WM, Sindelar CV, Rosenfeld SS, Moores CA

EMDB-1451:
Human T-lymphotropic virus-1 visualized at the virological synapse by electron tomography.
Method: electron tomography / : Majorovits E, Nejmeddine M, Tanaka Y, Taylor GP, Fuller SD, Bangham CRM

EMDB-1450:
Human T-lymphotropic virus-1 visualized at the virological synapse by electron tomography.
Method: electron tomography / : Majorovits E, Nejmeddine M, Tanaka Y, Taylor GP, Fuller SD, Bangham CRM

EMDB-1452:
Human T-lymphotropic virus-1 visualized at the virological synapse by electron tomography.
Method: electron tomography / : Majorovits E, Nejmeddine M, Tanaka Y, Taylor GP, Fuller SD, Bangham CRM

EMDB-1453:
Human T-lymphotropic virus-1 visualized at the virological synapse by electron tomography.
Method: electron tomography / : Majorovits E, Nejmeddine M, Tanaka Y, Taylor GP, Fuller SD, Bangham CRM

EMDB-1454:
Human T-lymphotropic virus-1 visualized at the virological synapse by electron tomography.
Method: electron tomography / : Majorovits E, Nejmeddine M, Tanaka Y, Taylor GP, Fuller SD, Bangham CRM

EMDB-1273:
Centrosome polarization delivers secretory granules to the immunological synapse.
Method: electron tomography / : Stinchcombe JC, Majorovits E, Bossi G, Fuller SD, Griffiths GM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more