[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,044 items for (author: lim & k)

EMDB-70129:
KICSTOR-GATOR1 complex (SZT2 [1300-2400]) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70130:
KICSTOR-GATOR1 complex (SZT2 [2000-3200], KPTN, ITFG2) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70131:
KICSTOR-GATOR1 complex (SZT2 [2800-3432], C12orf66) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70132:
KICSTOR-GATOR1 (SZT2 [1-2000], NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70134:
KICSTOR-GATOR1 (DEPDC5, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70135:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70137:
KICSTOR-GATOR1 dimer supercomplex (DEPDC5) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70138:
KICSTOR-GATOR1 dimer supercomplex (SZT2, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5a:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-52774:
Cryo-electron tomogram of cryo-FIB milled Nostoc PCC7120 wild-type
Method: electron tomography / : Mueller T, Kleusberg FM, Roganowicz K, Weiss G, Coles M, Selim KA

EMDB-52775:
Cryo-electron tomogram of cryo-FIB milled Nostoc PCC7120 cseKO
Method: electron tomography / : Mueller T, Kleusberg FM, Roganowicz K, Weiss G, Coles M, Selim KA

EMDB-52776:
Cryo-electron tomogram of cryo-FIB milled Nostoc PCC7120 cse KO
Method: electron tomography / : Mueller T, Kleusberg FM, Roganowicz K, Weiss G, Coles M, Selim KA

EMDB-70116:
The KICSTOR-GATOR1 complex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70117:
KICSTOR-GATOR1 complex (SZT2 [1-1330], NPRL2, NPRL3, DEPDC5) focused refinement.
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70136:
KICSTOR-GATOR1 dimer supercomplex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70140:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70141:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5d:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5e:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-50618:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50622:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50625:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50634:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50715:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-53711:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fo6:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fog:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fok:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fp3:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9frj:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9r75:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-64610:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 1)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64611:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 2)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64612:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 3)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64614:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 4)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64615:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 2 (focused refinement in chemerin and GPR1)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64616:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 2 (focused refinement in beta-arrestin 2)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64617:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 2 (consensus refinement)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64618:
Composite map of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 2
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-64619:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to beta-arrestin 1 in ligand-free state
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uyh:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 1)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uyi:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 2)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uyj:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 3)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uyl:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 4)
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uym:
Composite map of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 2
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

PDB-9uyn:
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to beta-arrestin 1 in ligand-free state
Method: single particle / : Cai H, Lin X, Zhao L, He M, Yu J, Zhang B, Ma Y, Xie C, Shui W, Zhao Q, Zhu Y, Wu B

EMDB-49560:
Consensus map of HSV-1 helicase-primase in complex with a forked DNA and amenamevir
Method: single particle / : He Q, Baranovskiy AG, Morstadt LM, Babayeva ND, Lim C, Tahirov TH

EMDB-49561:
Focused map of UL5-UL52 (C-terminal and N-terminal) of HSV-1 helicase-primase in complex with a forked DNA and amenamevir
Method: single particle / : He Q, Baranovskiy AG, Morstadt LM, Babayeva ND, Lim C, Tahirov TH

EMDB-49562:
Focused map of UL8-UL52(410-893) of HSV-1 helicase-primase in complex with a forked DNA and amenamevir
Method: single particle / : He Q, Baranovskiy AG, Morstadt LM, Babayeva ND, Lim C, Tahirov TH

EMDB-49563:
Composite structure of HSV-1 helicase-primase in complex with a forked DNA and amenamevir
Method: single particle / : He Q, Baranovskiy AG, Morstadt LM, Babayeva ND, Lim C, Tahirov TH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more