[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,898 items for (author: liu & z)

EMDB-72943:
BG505gp140SOSIP.T332N_Q653L collected on 300 kV TFS Krios.
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-72966:
BG505gp140SOSIP.T332N_Q653L collected on 100 kV Tundra with Falcon C detector
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-65074:
Complex structure of BoNT-like PG1 at pH 6.0
Method: single particle / : Liu Z, Chen P

PDB-9vi0:
Complex structure of BoNT-like PG1 at pH 6.0
Method: single particle / : Liu Z, Chen P

EMDB-63870:
cryo-EM structure of l-SPD bound D1R-Gs complex
Method: single particle / : Zhang XY, Liu H, Zhuang YW, Xu HE

EMDB-63871:
cryo-EM structure of l-SPD binding to D2R
Method: single particle / : Zhang XY, Liu H, Zhuang YW, Xu HE

PDB-9u5e:
cryo-EM structure of l-SPD bound D1R-Gs complex
Method: single particle / : Zhang XY, Liu H, Zhuang YW, Xu HE

PDB-9u5f:
cryo-EM structure of l-SPD binding to D2R
Method: single particle / : Zhang XY, Liu H, Zhuang YW, Xu HE

EMDB-77061:
95-bp double-stranded DNA minicircle: poly(A:T) model
Method: single particle / : Liu Y, Qin PZ

PDB-13gq:
95-bp double-stranded DNA minicircle: poly(A:T) model
Method: single particle / : Liu Y, Qin PZ

EMDB-67105:
The structure of PldB-PA5088 complex state_1
Method: single particle / : Yang JW, Yang XY, Li ZQ

EMDB-67118:
The structure of PldB-PA5088 complex state_2
Method: single particle / : Yang JW, Yang XY, Li ZQ

PDB-9xq9:
The structure of PldB-PA5088 complex state_1
Method: single particle / : Yang JW, Yang XY, Li ZQ

PDB-9xqm:
The structure of PldB-PA5088 complex state_2
Method: single particle / : Yang JW, Yang XY, Li ZQ

EMDB-80843:
Cryo-EM structure of GroEL-GroES complex from cell lysates on carbon nanotubes
Method: single particle / : Song JL, Wang ZN, Wang HW, Liu N

EMDB-80844:
Cryo-EM structure of 20S proteasome from cell lysates on carbon nanotubes
Method: single particle / : Song JL, Wang ZN, Wang HW, Liu N

EMDB-80845:
Cryo-EM structure of GroEL-GroES complex on carbon nanotubes
Method: single particle / : Song JL, Wang ZN, Wang HW, Liu N

EMDB-67556:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to 3CF5 Fab
Method: single particle / : Niu C, Liu B, Li Z, Xiong X

EMDB-67557:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to 3BG3 IgG
Method: single particle / : Niu C, Liu B, Li Z, Xiong X

PDB-21bo:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to 3CF5 Fab
Method: single particle / : Niu C, Liu B, Li Z, Xiong X

PDB-21bp:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to 3BG3 IgG
Method: single particle / : Niu C, Liu B, Li Z, Xiong X

PDB-26hh:
Cryo-EM structure of Ll.LtrB Group II intron within graphene reservoir
Method: single particle / : Zheng LM, Song JL, Zhao XL, Liu N, Peng HL, Wang HW

EMDB-67325:
Cryo-EM structure of PI3Kalpha H1047R mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-67327:
Cryo-EM structure of PI3Kalpha E545K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-67328:
Cryo-EM structure of PI3Kalpha E542K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw5:
Cryo-EM structure of PI3Kalpha H1047R mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw7:
Cryo-EM structure of PI3Kalpha E545K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

PDB-9xw8:
Cryo-EM structure of PI3Kalpha E542K mutation in complex with STX-478
Method: single particle / : Liu X, Chen Y, Li G, Chen A, Zhou Q, Wang MW

EMDB-63836:
Cryo-EM map of UBE3A monomer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-63832:
Cryo-EM structure of D-peptide-GPCR-Gq complex
Method: single particle / : Liu SH, Zhang YJ, Hua T, Liu ZJ

PDB-9u43:
Cryo-EM structure of D-peptide-GPCR-Gq complex
Method: single particle / : Liu SH, Zhang YJ, Hua T, Liu ZJ

EMDB-66226:
structure of hOCTN1-Ergothioneine complex
Method: single particle / : Xu B, Wang Y

EMDB-66227:
Structure of hOCTN1 in apo state
Method: single particle / : Xu B

EMDB-63831:
Cryo-EM structure of peptide GPCR-Gq complex
Method: single particle / : Liu SH, Zhang YJ, Hua T, Liu ZJ

PDB-9u40:
Cryo-EM structure of peptide GPCR-Gq complex
Method: single particle / : Liu SH, Zhang YJ, Hua T, Liu ZJ

EMDB-66273:
Structure of dimeric phosphomimetic mutant of Tribolium castaneum (Tc) PINK1
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

PDB-9wuw:
Structure of dimeric phosphomimetic mutant of Tribolium castaneum (Tc) PINK1
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

EMDB-63837:
Structure of UBE3A T485E tetramer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

PDB-9u4a:
Structure of UBE3A T485E tetramer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-63839:
Structure of UBE3A dimer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

PDB-9u4c:
Structure of UBE3A dimer
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-66275:
Structure of dimeric autoinhibited Tribolium castaneum (Tc) PINK1 L552R mutant
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

PDB-9wuy:
Structure of dimeric autoinhibited Tribolium castaneum (Tc) PINK1 L552R mutant
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

EMDB-66271:
Structure of dimeric autoinhibited Tribolium castaneum (Tc) PINK1 L552R mutant in complex with Ca2+
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, LIu Z

PDB-9wuu:
Structure of dimeric autoinhibited Tribolium castaneum (Tc) PINK1 L552R mutant in complex with Ca2+
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, LIu Z

EMDB-63841:
Focused refinement of E6-p53 complex
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-63842:
Focused refinement of UBE3A-E6 complex
Method: single particle / : Ren XK, Xin J, Liu JB, Chen SW, Yan KG, Liu XT, Zhang MJ

EMDB-66272:
Structure of dimeric Tribolium castaneum (Tc) PINK1 L552R mutant in complex with Ca2+
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

PDB-9wuv:
Structure of dimeric Tribolium castaneum (Tc) PINK1 L552R mutant in complex with Ca2+
Method: single particle / : Xu HQ, Liu XY, Xue JR, Li BX, Yu XR, Chen C, Qin XH, Mi LZ, Liu Z

EMDB-67942:
a bacterial caspase bound to ligand
Method: single particle / : Wang WH, Feng Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more