[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: koehler & a)

EMDB-13149:
Mammalian orthoreovirus T3SA- in complex with the neural receptor NgR1
Method: single particle / : Strebl M, Sutherland DM, Yu X, Hu L, Wang Z, Prasad BVV, Stehle T, Dermody TS

EMDB-13150:
Mammalian orthoreovirus T3SA-
Method: single particle / : Strebl M, Sutherland DM, Yu X, Hu L, Wang Z, Prasad BVV, Stehle T, Dermody TS

EMDB-25921:
CryoET of presequence protease single particle
Method: electron tomography / : Noble AJ, Liang W, Tang WJ

EMDB-22278:
CryoEM structure of human presequence protease in partial open state 1
Method: single particle / : Liang WG, Zhao M

EMDB-22279:
CryoEM structure of human presequence protease in partial open state 2
Method: single particle / : Liang WG, Zhao M

EMDB-22280:
CryoEM structure of human presequence protease in open state
Method: single particle / : Liang WG, Zhao M

EMDB-22281:
CryoEM structure of human presequence protease in partial closed state 1
Method: single particle / : Liang WG, Zhao M

PDB-6xos:
CryoEM structure of human presequence protease in partial open state 1
Method: single particle / : Liang WG, Zhao M, Tang W

PDB-6xot:
CryoEM structure of human presequence protease in partial open state 2
Method: single particle / : Liang WG, Zhao M, Tang W

PDB-6xou:
CryoEM structure of human presequence protease in open state
Method: single particle / : Liang WG, Zhao M, Tang W

PDB-6xov:
CryoEM structure of human presequence protease in partial closed state 1
Method: single particle / : Liang WG, Zhao M, Tang W

EMDB-11660:
Structure of VP40 matrix layer in EBOV NP-VP24-VP35-VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11661:
Structure of VP40 matrix layer in EBOV VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11662:
Structure of VP40 matrix layer in EBOV VP40-GP VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11663:
Structure of VP40 matrix layer in intact MARV virions
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11664:
Structure of VP40 matrix layer in MARV VP40 VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-11665:
Structure of GP in EBOV VP40-GP VLPs
Method: subtomogram averaging / : Wan W, Clarke M, Norris M, Kolesnikova L, Koehler A, Bornholdt ZA, Becker S, Saphire EO, Briggs JAG

EMDB-3870:
Cryo-electron tomogram of Ebola virus nucleoprotein, residues 1-450
Method: electron tomography / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3872:
Cryo-electron tomogram of Ebola virus virus-like particles
Method: electron tomography / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3873:
The structure of Ebola virus nucleocapsid from virions
Method: subtomogram averaging / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3874:
Cryo-electron tomogram of Ebola virus
Method: electron tomography / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3875:
The structure of Marburg virus nucleocapsid from virions
Method: subtomogram averaging / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3876:
Cryo-electron tomogram of Marburg virus
Method: electron tomography / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

EMDB-3869:
The structure of Ebola virus nucleoprotein (residues 1-450) in nucleocapsid-like assemblies
Method: subtomogram averaging / : Wan W, Kolesnikova L

EMDB-3871:
The structure of Ebola virus nucleocapsid-like assemblies from recombinant virus-like particles (nucleoprotein, VP24,VP35,VP40)
Method: subtomogram averaging / : Wan W, Kolesnikova L

PDB-6ehl:
Model of the Ebola virus nucleoprotein in recombinant nucleocapsid-like assemblies
Method: subtomogram averaging / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

PDB-6ehm:
Model of the Ebola virus nucleocapsid subunit from recombinant virus-like particles
Method: subtomogram averaging / : Wan W, Kolesnikova L, Clarke M, Koehler A, Noda T, Becker S, Briggs JAG

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more