[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: klena & n)

EMDB-50495:
Axonemal doublet 48nm repeat of the tubulin glycylation deficient C. reinhardtii strain ttll3::BSD
Method: subtomogram averaging / : Alvarez Viar G

EMDB-50501:
48nm repeat of the axonemal doublets of the tubulin polyglutamylation deficient C. reinhardtii strain ttll9::KO
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50505:
32nm repeat of the central pair complex 1 of the tubulin glycylation depleted C.reinhardtii strain ttll3::BSD
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50513:
32nm repeat of the central pair complex 1 of the tubulin polyglutamylation deficient C.reinhardtii strain ttll9::NAT
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50559:
16nm repeat of the central pair complex 2 of the tubulin glycylation depleted strain ttll3::BSD of C.reinhardtii
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50560:
16nm repeat of the central pair complex 2 of the tubulin polyglutamylation deficient ttll9::NAT strain from C.reinhardtii
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50561:
96nm repeat of the C.reinhardtii axoneme
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50563:
96nm repeat of the axonemal doublet from mouse respiratory cilia
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50564:
96 nm repeat of the axonemal microtubule doublets of the tpg1 strain from C.reinhardtii
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50565:
96nm repeat of the axonemal doublets from the tubulin glycylation depleted ttll3 strain from C.reinhardtii
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50568:
96nm repeat of the axonemal doublets from C.reinhardtii decorated with polyE antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50569:
96nm repeat of the axonemal doublets of the tpg1 strain from C.reinhardtii incubated with polyE antiobodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50572:
96nm repeat of the axonemal doublets of the ida5 strain from C.reinhardtii decorated with polyE antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50573:
96nm repeat of the axonemal doublets of mouse respiratory cilia decorated with polyE antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50575:
96nm repeat of the axonemal doublets of C.reinhardtii decorated with Glypep1 antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50577:
96nm repeat of the axonemal doublets of mouse respiratory cilia incubated with Glypep1 antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50579:
96nm repeat of the axonemal doublet of reactivated axonemes of C.reinhardtii
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50596:
96nm repeat of the axonemal doublets from the ttll3 strain of C. reinhardtii incubated with Glypep1 antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50597:
96nm repeat of the axonemal doublets of the ida5 strain from C.reinhardtii decoreated with Glypep1 antibodies
Method: subtomogram averaging / : Alvarez Viar G, Pigino G

EMDB-50592:
SOLIST native mouse heart muscle tomogram #3
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50603:
SOLIST cryo-tomogram of native mouse corpus callosum #1
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50604:
SOLIST cryo-tomogram of native mouse corpus callosum #2
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50605:
native mouse liver solist tomogram #1
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50606:
native mouse liver solist tomogram #2
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50607:
SOLIST cryo-tomogram of human brain organoid #1
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50608:
SOLIST cryo-tomogram of human brain organoid #2
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50620:
S. cerevisiae ribosome from SOLIST lamellas
Method: subtomogram averaging / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50630:
mus musculus ribosome from SOLIST lamellas
Method: subtomogram averaging / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50646:
mus musculus heart thin filament from SOLIST lamellas
Method: subtomogram averaging / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50655:
mus musculus heart thin filament with myosin heads from SOLIST lamellas
Method: subtomogram averaging / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50580:
SOLIST cryo-tomogram of native left ventricle mouse heart muscle #1
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50582:
SOLIST native mouse heart muscle tomogram #2
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-15252:
In situ subtomogram average of the C. reinhardtii stellate at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15253:
In situ subtomogram average of the C. reinhardtii Y-link at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15254:
In situ subtomogram average of the C. reinhardtii MTD sleeve at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15255:
In situ subtomogram average of the C. reinhardtii MTD at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15256:
Composite map of the C. reinhardtii ciliary transition zone (structures attached to a single MTD) from in situ subtomogram averaging
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15257:
Composite map of the C. reinhardtii ciliary transition zone (full 9-fold assembly) from in situ subtomogram averaging
Method: subtomogram averaging / : van den Hoek HG, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15258:
In situ subtomogram average of C. reinhardtii IFT-B at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15259:
In situ subtomogram average of C. reinhardtii IFT-A at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15260:
In situ subtomogram average of C. reinhardtii dynein-1b at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15261:
Composite map of the C. reinhardtii IFT (segment of a fully assembled train) at the ciliary transition zone
Method: subtomogram averaging / : van den Hoek HG, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Pigino G, Engel BD

EMDB-15262:
Tomogram #3 of the C. reinhardtii ciliary transition zone
Method: electron tomography / : van den Hoek HG, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-15263:
Tomogram #12 of the C. reinhardtii ciliary transition zone
Method: electron tomography / : van den Hoek HG, Schaffer M, Erdmann PS, Wan WN, Plitzko JM, Baumeister W, Engel BD

EMDB-10726:
Electron cryo-tomography reconstruction and subvolume averaging of the A-C linker from the end of the proximal region of Paramecium tetraurelia basal body
Method: subtomogram averaging / : Guichard P, Hamel V, Le Guennec M

EMDB-10727:
Electron cryo-tomography reconstruction and subvolume averaging of the A-C linker from the start of the proximal region of Paramecium tetraurelia basal body
Method: subtomogram averaging / : Guichard P, Hamel V, Le Guennec M

EMDB-10728:
Electron cryo-tomography reconstruction and subvolume averaging of the microtubule triplet from the end of the proximal region of Paramecium tetraurelia basal body
Method: subtomogram averaging / : Guichard P, Hamel V, Le Guennec M

EMDB-10729:
Electron cryo-tomography reconstruction and subvolume averaging of the microtubule triplet from the start of the proximal region of Paramecium tetraurelia basal body
Method: subtomogram averaging / : Guichard P, Hamel V, Le Guennec M

EMDB-4926:
Microtubule triplet of isolated Paramecium tetraurelia centriole - inner core
Method: subtomogram averaging / : Le Guennec M, Klena N, Tassin AM, Van der Hoek H, Erdmann PS, Schaffer M, Kovacik L, Goldie KN, Stahlberg H, Engel BD, Hamel V, Guichard P

EMDB-4927:
Junction between microtubule triplet of isolated Paramecium tetraurelia centriole - inner core region
Method: subtomogram averaging / : Le Guennec M, Klena N, Tassin AM, Van der Hoek H, Erdmann PS, Schaffer M, Kovacik L, Goldie KN, Stahlberg H, Engel BD, Hamel V, Guichard P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more