[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 366 items for (author: kim & ds)

EMDB-71850:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71851:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71852:
Mitochondria with amorphous calcium phosphate granules from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71853:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71859:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71860:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71861:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71862:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71863:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71864:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71865:
Octacalcium phosphate-like precipitates
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71867:
Octacalcium phosphate-like precipitates
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-71868:
Octacalcium phosphate-like precipitates
Method: electron tomography / : Anderson EA, Ludtke SJ

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-71770:
Structure of human serotonin transporter bound to small molecule zPZd in lipid nanodisc and NaCl
Method: single particle / : Billesboelle CB, Manglik A

EMDB-71775:
Locally-refined Mu-Opioid Receptor bound with novel compound 0505
Method: single particle / : Kim JY, Wu Y, Manglik A, Shoichet BK

EMDB-48375:
GammaH2AX containing nucleosomes, Parallel stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48376:
GammaH2AX containing nucleosome, Canonical (Class 1)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48378:
GammaH2AX containing nucleosome, Half-wrapped (Class 2)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48379:
GammaH2AX containing nucleosome, Extended (Class 3)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48392:
H2AX containing nucleosome, Canonical (Class 1)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48394:
H2AX containing nucleosomes, Parallel stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48395:
H2AX containing nucleosomes, Left offset stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48396:
H2AX containing nucleosomes, Right offset stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48403:
H2AX containing nucleosome, Unwrapped (Class 2)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48406:
Gamma-H2AX containing nucleosome bound to MCPH1 BRCT
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48547:
gamma-H2AX containing nucleosome bound to MDC1 BRCT
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mll:
GammaH2AX containing nucleosomes, Parallel stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mln:
GammaH2AX containing nucleosome, Canonical (Class 1)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mlr:
GammaH2AX containing nucleosome, Half-wrapped (Class 2)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mls:
GammaH2AX containing nucleosome, Extended (Class 3)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mmk:
H2AX containing nucleosome, Canonical (Class 1)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mmm:
H2AX containing nucleosomes, Parallel stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mmn:
H2AX containing nucleosomes, Left offset stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mmo:
H2AX containing nucleosomes, Right offset stack
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

PDB-9mmt:
H2AX containing nucleosome, Unwrapped (Class 2)
Method: single particle / : Panigrahi R, Edwards R, Glover JNM

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-44865:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-44866:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bs9:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bsb:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-71783:
Locally-refined structure of alpha2a adrenergic receptor in complex with Go heterotrimer, scFv16, and compound Z7149
Method: single particle / : Srinivasan K, Wu Y, Billesboelle C, Kim JY, Manglik A, Shoichet BK

EMDB-47426:
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Method: single particle / : Jaiswal D, Bajic G

PDB-9e21:
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Method: single particle / : Jaiswal D, Bajic G

EMDB-45732:
Cryo-EM structure of Gq-coupled FFA2 in complex with TUG-1375 and 4-CMTB
Method: single particle / : Zhang X, Tikhonova I, Milligan G, Zhang C

EMDB-45738:
Cryo-EM structure of Gq-coupled FFA2 in complex with TUG-1375 and compound 187
Method: single particle / : Zhang X, Tikhonova I, Milligan G, Zhang C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more