[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,691 items for (author: juan & d)

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-63693:
At S1+tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7u:
At S1+tRNA trimer
Method: single particle / : Zhang SS

EMDB-62620:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q, Xia N

EMDB-65522:
Cryo-EM structure of a 1C4 SpyTag-SpyCatcher mi3 nanoparticle
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-65523:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9kwy:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9w14:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-53450:
Structure of the Plum Pox Virus (PPV)
Method: helical / : Bonnet DMV, Chaves-Sanjuan A

PDB-9qy3:
Structure of the Plum Pox Virus (PPV)
Method: helical / : Bonnet DMV, Chaves-Sanjuan A

EMDB-70223:
Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

PDB-9o8d:
Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-62662:
Cryo-EM structure of the LH1 complex from Roseiflexus castenholzii
Method: single particle / : Wang L, Yu LJ

EMDB-62663:
Cryo-EM structure of the RC complex from Rhodospirillum rubrum
Method: single particle / : Wang L, Yu LJ

PDB-9kzg:
Cryo-EM structure of the LH1 complex from Roseiflexus castenholzii
Method: single particle / : Wang L, Yu LJ

PDB-9kzh:
Cryo-EM structure of the RC complex from Rhodospirillum rubrum
Method: single particle / : Wang L, Yu LJ

EMDB-72405:
Cryo-EM structure of the human TRPM4 channel in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-72406:
Cryo-EM structure of the human TRPM4 channel in complex with EGTA and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-72407:
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2a:
Cryo-EM structure of the human TRPM4 channel in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2b:
Cryo-EM structure of the human TRPM4 channel in complex with EGTA and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2c:
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-71088:
MscS in Glyco-DIBMA Native Nanodiscs (C7 symmetry)
Method: single particle / : Moller E, Britt M, Zhou F, Yang H, Anishkin A, Ernst R, Juan VM, Sukharev S, Matthies D

PDB-9p0n:
MscS in Glyco-DIBMA Native Nanodiscs (C7 symmetry)
Method: single particle / : Moller E, Britt M, Zhou F, Yang H, Anishkin A, Ernst R, Juan VM, Sukharev S, Matthies D

EMDB-48508:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS12
Method: single particle / : Wu S, Lei D

EMDB-48509:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS5
Method: single particle / : Wu S, Lei D

PDB-9mpz:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS12
Method: single particle / : Wu S, Lei D

PDB-9mq0:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS5
Method: single particle / : Wu S, Lei D

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-63192:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63193:
Psilocin-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63194:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63195:
Ariadne-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-63196:
DOI-NBOMe-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll7:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll8:
Psilocin-bound Serotonin 2A (5-HT2A) receptor-Gi complex
Method: single particle / : Xu Z, Shao ZH

PDB-9ll9:
DOI-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9lla:
Ariadne-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

PDB-9llb:
DOI-NBOMe-bound Serotonin 2A (5-HT2A) receptor-Gq complex
Method: single particle / : Xu Z, Shao ZH

EMDB-55441:
In situ structure of wild-type HIV-1 CA hexamer prior to nuclear import
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55443:
In situ structure of wild-type HIV-1 CA hexamer post nuclear import
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55445:
In situ structure of N74D HIV-1 CA hexamer post nuclear import
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55446:
In situ structure of the H1-bound nucleosome
Method: subtomogram averaging / : Hou Z, Zhang P

EMDB-55447:
In situ structure of stacking H1-bound nucleosomes
Method: subtomogram averaging / : Hou Z, Zhang P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more