[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 13,746 items for (author: jia & l)


EMDB Unreleased entry

EMDB-80106:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

PDB-25ho:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y


EMDB Unreleased entry

EMDB-46803:
CryoEM structure of BoNT/E at pH5, class 5, BoNT/A-like
Method: single particle / : Gao L


EMDB Unreleased entry

EMDB-65272:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J


EMDB Unreleased entry

EMDB-65274:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqp:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqr:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J


EMDB Unreleased entry

EMDB-69132:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

PDB-23or:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N


EMDB Unreleased entry

EMDB-65582:
Cryo-EM structure of two abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M


EMDB Unreleased entry

EMDB-65591:
Cryo-EM structure of four abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M


EMDB Unreleased entry

EMDB-65592:
Cryo-EM structure of nucleotide-free LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w2w:
Cryo-EM structure of two abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w35:
Cryo-EM structure of four abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w36:
Cryo-EM structure of nucleotide-free LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M


EMDB Unreleased entry

EMDB-65314:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T


EMDB Unreleased entry

EMDB-65343:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-9vt4:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

PDB-9vts:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-36cg:
Apo form of human bile salts export pump ABCB11
Method: single particle / : Wang L, How WT


EMDB Unreleased entry

EMDB-75723:
Refined plasminogen binding group A streptococcus M-like protein isolate from AP53 bound to human plasminogen
Method: single particle / : Readnour BM, Tjia-Fleck SK, Castellino FJ


EMDB Unreleased entry

EMDB-65484:
Tspan-7 Tetramer Structure in Retraction Fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW


EMDB Unreleased entry

EMDB-65485:
Tspan-7 dimer structure in retraction fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW


EMDB Unreleased entry

EMDB-65519:
in situ Tspan-7 spiral structure in cellular retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW


EMDB Unreleased entry

EMDB-65524:
in situ Tspan7-GFP spiral in retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

PDB-9w2b:
Tspan-7 dimer in retraction fibers
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

PDB-9w2d:
Tspan7 tetramer in retraction fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-73526:
Cryo-EM structure of the human TRPM4 channel bound to NC1 in the presence of EGTA.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

EMDB-73527:
Cryo-EM structure of the human TRPM4 channel in an open state bound to NC1 and PI(4,5)P2.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

EMDB-73528:
Cryo-EM structure of the human TRPM4 channel in an open state bound to NC1 and PI(4,5)P2 in the presence of EGTA.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

EMDB-73529:
Cryo-EM structure of the mouse TRPM4 channel bound to NC1.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

EMDB-73530:
Cryo-EM structure of the mouse TRPM4 channel bound to NC1 and PI(4,5)P2.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

PDB-9yvk:
Cryo-EM structure of the human TRPM4 channel bound to NC1 in the presence of EGTA.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

PDB-9yvl:
Cryo-EM structure of the human TRPM4 channel in an open state bound to NC1 and PI(4,5)P2.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

PDB-9yvm:
Cryo-EM structure of the human TRPM4 channel in an open state bound to NC1 and PI(4,5)P2 in the presence of EGTA.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

PDB-9yvn:
Cryo-EM structure of the mouse TRPM4 channel bound to NC1.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

PDB-9yvo:
Cryo-EM structure of the mouse TRPM4 channel bound to NC1 and PI(4,5)P2.
Method: single particle / : Teixeira-Duarte CM, Jiang Y

EMDB-49339:
The structure of BoNT/A in complex with a neutralizing antibody 2G11
Method: single particle / : Chen B, Jin R

EMDB-76739:
The density map of BoNT/A mutant (BoNT/A-WFY)
Method: single particle / : Jin R, Chen B

PDB-9ney:
The structure of BoNT/A in complex with a neutralizing antibody 2G11
Method: single particle / : Chen B, Jin R

EMDB-69221:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-69482:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN)
Method: single particle / : Li XZ, Jiang Y

EMDB-69484:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN-DDB1)
Method: single particle / : Li XZ, Jiang Y

EMDB-69485:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 consensus refinement
Method: single particle / : Li XZ, Jiang Y

PDB-23sr:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-71429:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71430:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71431:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71432:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71433:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more