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Showing all 48 items for (author: isobe & m)

EMDB-51919:
Grid prepared using the vitrobot of KtrA.ADP from B. subtilis, small dataset
Method: single particle / : Hirst IJ, Muench SP

EMDB-51921:
KtrA.ADP with a 100ms plunge time on the chameleon
Method: single particle / : Hirst IJ, Muench SP

EMDB-51922:
KtrA.ADP with a 300ms plunge time on the chameleon
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51923:
KtrA.ADP with 2500ms plunge time on the chameleon
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51924:
KtrA.ADP with cyclic di-AMP prepared on the vitrobot
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51925:
KtrA.ADP, chameleon with 180ms plunge time and DDM added
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51926:
KtrA.ADP from chameleon with 2500ms plunge time and DDM added as a surfactant
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51927:
KtrA.ADP with cyclic di-AMP from chameleon with 100ms plunge time.
Method: single particle / : Hirst IJ, Muench SP, Darrow MC, Scarff CA, Thompson RF

EMDB-51928:
KtrA.ADP prepared on the vitrobot, full particle stack
Method: single particle / : Hirst IJ, Muench SP

EMDB-19675:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19676:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19576:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19582:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxh:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxx:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17216:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17229:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17236:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8ovj:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17208:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17212:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

EMDB-17249:
CRYO-EM CONSENSUS MAP OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17250:
CRYO-EM FOCUSED REFINEMENT MAPS OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17254:
CRYO-EM CONSENSUS MAP OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 SKO
Method: single particle / : RAJAN KS, YONATH A

EMDB-17255:
CRYO-EM FOCUSED REFINEMENT OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

PDB-8ova:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8ove:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

EMDB-15272:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
Method: single particle / : Rajan KS, Yonath A, Bashan A

PDB-8a98:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
Method: single particle / : Rajan KS, Yonath A, Bashan A

EMDB-33045:
SARS-CoV-2 spike glycoprotein in complex with neutralizing antibody UT28K
Method: single particle / : Ozawa T, Tani H, Anraku Y, Kita S, Igarashi E, Saga Y, Inasaki N, Kawasuji H, Yamada H, Sasaki S, Someoka M, Sasaki J, Hayakawa Y, Yamamoto Y, Morinaga Y, Kurosawa N, Isobe M, Fukuhara H, Maenaka K, Hashiguchi T, Kishi H, Kitajima I, Saito S, Niimi H

EMDB-0999:
Cryo-EM reconstruction of TLR7/Cpd-3 (SM-394830) complex in closed form
Method: single particle / : Zhang Z, Ohto U, Shimizu T

EMDB-1000:
Cryo-EM reconstruction of TLR7/Cpd-6 (DSR-139293) complex in closed form
Method: single particle / : Zhang Z, Ohto U, Shimizu T

EMDB-30000:
Cryo-EM reconstruction of TLR7/Cpd-6 (DSR-139293) complex in open form
Method: single particle / : Zhang Z, Ohto U, Shimizu T

EMDB-30001:
Cryo-EM reconstruction of TLR7/Cpd-7 (DSR-139970) complex in open form
Method: single particle / : Zhang Z, Ohto U, Shimizu T

EMDB-30002:
Cryo-EM structure of TLR7/Cpd-7 (DSR-139970) complex in open form
Method: single particle / : Zhang Z, Ohto U

PDB-6lw1:
Cryo-EM structure of TLR7/Cpd-7 (DSR-139970) complex in open form
Method: single particle / : Zhang Z, Ohto U, Shimizu T

EMDB-11232:
Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
Method: single particle / : Matzov D, Halfon H

PDB-6zj3:
Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
Method: single particle / : Matzov D, Halfon H, Zimmerman E, Rozenberg H, Bashan A, Gray MW, Yonath AE, Shalev-Benami M

EMDB-10223:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A

EMDB-10224:
Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
Method: single particle / : Matzov D, Sas-Chen A

EMDB-10503:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A

PDB-6skf:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

PDB-6skg:
Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

PDB-6th6:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A, Thomas JM, Santangelo T, Meier JL, Schwartz S, Shalev-Benami M

EMDB-7024:
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y

EMDB-7025:
Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y

PDB-6az1:
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Matzov D, Zimmerman E, Bashan A, Jaffe CL, Yonath A, Skiniotis G

PDB-6az3:
Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin
Method: single particle / : Shalev-Benami M, Zhang Y, Rozenberg H, Nobe Y, Taoka M, Matzov D, Zimmerman E, Bashan A, Isobe T, Jaffe CL, Yonath A, Skiniotis G

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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