[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 375 items for (author: inoue & a)

EMDB-72655:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72732:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-72733:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9y7h:
Gb1g2 crosslinked to PLCb3
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yao:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

PDB-9yap:
Gbg crosslinked to PLCb3 - second conformation
Method: single particle / : Fisher IJ, Lyon AM

EMDB-63736:
Glycogen phosphorylase dimer from E. coli
Method: single particle / : Takai M, Fukuda Y, Inoue T

EMDB-65042:
Glycogen phosphorylase dimer from E. coli in complex with glycogen
Method: single particle / : Takai M, Fukuda Y, Inoue T

PDB-9m9p:
Glycogen phosphorylase dimer from E. coli
Method: single particle / : Takai M, Fukuda Y, Inoue T

EMDB-64926:
Cryo-EM structure of glycogen phosphorylase from Dorea longicatena (monomer form)
Method: single particle / : Takai M, Tanino H, Shobu K, Fukuda Y, Inoue T

EMDB-64927:
Cryo-EM structure of glycogen phosphorylase from Dorea longicatena (dimer form)
Method: single particle / : Takai M, Tanino H, Shobu K, Fukuda Y, Inoue T

EMDB-64931:
Cryo-EM map of glycogen phosphorylase from Dorea longicatena (monomer form with extra density)
Method: single particle / : Takai M, Tanino H, Shobu K, Fukuda Y, Inoue T

EMDB-67417:
R583A mutant of glycogen phosphorylase from Segatella copri
Method: single particle / : Takai M, Fukuda Y

EMDB-67418:
R583A mutant of glycogen phosphorylase from Segatella copri in the presence of AMP
Method: single particle / : Takai M, Fukuda Y

PDB-9vbl:
Cryo-EM structure of glycogen phosphorylase from Dorea longicatena (monomer form)
Method: single particle / : Takai M, Tanino H, Shobu K, Fukuda Y, Inoue T

PDB-9vbm:
Cryo-EM structure of glycogen phosphorylase from Dorea longicatena (dimer form)
Method: single particle / : Takai M, Tanino H, Shobu K, Fukuda Y, Inoue T

EMDB-62853:
Glycogen phosphorylase from Segatella copri
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-63749:
Glycogen phosphorylase from Segatella copri bound to glycogen-chain A and E
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-63814:
Glycogen phosphorylase from Segatella copri in complex with AMP
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-63816:
Glycogen phosphorylase from Segatella copri pentamer in complex with AMP chains D and E
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-64491:
Glycogen phosphorylase from Segatella copri decamer in complex with AMP
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-64514:
Glycogen phosphorylase from Segatella copri bound to glycogen-pentamer
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9l6i:
Glycogen phosphorylase from Segatella copri
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9ma8:
Glycogen phosphorylase from Segatella copri bound to glycogen-chain A and E
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9u3a:
Glycogen phosphorylase from Segatella copri in complex with AMP
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9u3k:
Glycogen phosphorylase from Segatella copri pentamer in complex with AMP chains D and E
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9utg:
Glycogen phosphorylase from Segatella copri decamer in complex with AMP
Method: single particle / : Shobu K, Fukuda Y, Inoue T

PDB-9uup:
Glycogen phosphorylase from Segatella copri bound to glycogen-pentamer
Method: single particle / : Shobu K, Fukuda Y, Inoue T

EMDB-62816:
E. coli MaeB acetyl-CoA bound form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-63586:
E. coli MaeB holo form ME domain dimer
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-63599:
E. coli MaeB acetyl-CoA bound form ME domain dimer
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9l4n:
E. coli MaeB acetyl-CoA bound form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9m2i:
E. coli MaeB holo form ME domain dimer
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9m35:
E. coli MaeB acetyl-CoA bound form ME domain dimer
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-62540:
E. coli MaeB holo form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-62541:
B. bacteriovorus MaeB holo form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-62542:
B. bacteriovorus MaeB acetyl-CoA bound form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9krt:
E. coli MaeB holo form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9kru:
B. bacteriovorus MaeB holo form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

PDB-9krv:
B. bacteriovorus MaeB acetyl-CoA bound form
Method: single particle / : Sassa M, Yamato H, Tanino H, Fukuda Y, Inoue T

EMDB-62868:
Cryo-EM structure of the d16:1 S1P-bound S1PR3 and Gq complex
Method: single particle / : Im D, Asada H, Iwata S, Yamauchi M, Hagiwara M

EMDB-66136:
Cryo-EM structure of the d18:1 S1P-bound S1PR3 and Gq complex
Method: single particle / : Im D, Asada H, Iwata S, Yamauchi M, Hagiwara M

PDB-9l74:
Cryo-EM structure of the d16:1 S1P-bound S1PR3 and Gq complex
Method: single particle / : Im D, Asada H, Iwata S, Yamauchi M, Hagiwara M

PDB-9wp9:
Cryo-EM structure of the d18:1 S1P-bound S1PR3 and Gq complex
Method: single particle / : Im D, Asada H, Iwata S, Yamauchi M, Hagiwara M

EMDB-64947:
Cryo-EM structure of the human kappa opioid receptor signaling complex bound to compound A
Method: single particle / : Suno-Ikeda C, Sugita Y, Hirose M, Suno R

EMDB-65622:
Cryo-EM structure of human kappa opioid receptor -G protein signaling complex bound with U-50488H
Method: single particle / : Suno-Ikeda C, Takai T, Hirose M, Inoue A, Sugita Y, Kato T, Kobayashi T, Suno R

PDB-9v6o:
Cryo-EM structure of human kappa opioid receptor - G protein signaling complex bound with nalfurafine.
Method: single particle / : Suno-Ikeda C, Takai T, Hirose M, Inoue A, Sugita Y, Kato T, Kobayashi T, Suno R

PDB-9w49:
Cryo-EM structure of human kappa opioid receptor -G protein signaling complex bound with U-50488H
Method: single particle / : Suno-Ikeda C, Takai T, Hirose M, Inoue A, Sugita Y, Kato T, Kobayashi T, Suno R

EMDB-62028:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

PDB-9k3t:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more