[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 696 items for (author: hu & pj)

EMDB-56085:
Oligomer of the human Ndc80 complex decorating a microtubule
Method: subtomogram averaging / : Volkov V

EMDB-56086:
Ndc80-decorated microtubule
Method: subtomogram averaging / : Volkov V

EMDB-56087:
Microtubules in presence of Ndc80 and Ska, non-Ndc80 microtubule-bound molecules
Method: subtomogram averaging / : Volkov V

EMDB-56088:
Ndc80-decorated microtubule
Method: subtomogram averaging / : Volkov V

EMDB-49896:
Single-particle cryo-EM structure of the first variant of mobilized colistin resistance (MCR-1) in its ligand-bound state
Method: single particle / : Zinkle AP, Bunuro-Batista M, Herrera CM, Erramilli SK, Kloss B, Ashraf KU, Nosol K, Zhang G, Cater RJ, Marty MT, Kossiakoff AA, Trent MS, Nygaard R, Stansfeld PJ, Mancia F

EMDB-72825:
Human delta opioid receptor complex with mini-Gi and agonist DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72826:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72827:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72828:
receptor focused refinement of human delta opioid receptor complex with mini-Gi and DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72829:
receptor focused refinement of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72830:
receptor focused refinement of human delta opioid receptor complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72831:
conensus map of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72832:
receptor focused refinement of human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-47084:
Cryo-EM structure of LptB2FG apo-1
Method: single particle / : Su C

EMDB-47085:
Cryo-EM structure of LptB2FG apo-II
Method: single particle / : Su CC

EMDB-47086:
Cryo-EM structure of LptB2FG apo-III
Method: single particle / : Su CC

EMDB-47088:
Cryo-EM structure of LptB2FGC apo-I
Method: single particle / : Su CC

EMDB-47089:
Cryo-EM structure of LptB2FGC apo-II
Method: single particle / : Su CC

EMDB-48679:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 1A1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48680:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 1H2
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48681:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48682:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 7G4
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-49373:
CryoEM Structure of De Novo Antibody Fragment scFv 6 with C. difficile Toxin B (TcdB)
Method: single particle / : Weidle C, Borst AJ

EMDB-49405:
CryoEM Structure of De Novo VHH, VHH_flu_01, bound to influenza HA, strain A/USA:Iowa/1943 H1N1
Method: single particle / : Borst AJ, Weidle C

EMDB-48510:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48511:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48512:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1, 1A1 and CR9114
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48683:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 7G11
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48684:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12C11
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48685:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48686:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G8
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48687:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G9
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48688:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 13E8
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48689:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 17C12
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48690:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 17E3
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48692:
Negative stain EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48693:
A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal fab 1A1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48694:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 20D10
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48695:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 6G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48696:
Negative stain map of A/Red-tailed hawk/New York/NYCVH 22-8477/2022 H5 in complex with monoclonal Fab 12G1
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-48822:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fabs 1A1, 6G1, and CR9114.
Method: single particle / : Leon AN, Brouwer PJM, Rodriguez AJ, Han J, Ward AB

EMDB-71513:
SARS-CoV-2 Wuhan-Hu-1/BA.1 spike heterotrimer (HT2) with 3-'down' RBDs
Method: single particle / : Fan C, Dam KA, Bjorkman PJ

EMDB-71514:
SARS-CoV-2 Wuhan-Hu-1/BA.1 spike heterotrimer (HT2) with 1-'up' RBD
Method: single particle / : Fan C, Dam KA, Bjorkman PJ

EMDB-71515:
SARS-CoV-2 Wuhan-Hu-1/BA.1/Delta spike heterotrimer (HT3) with 3-'down' RBDs
Method: single particle / : Fan C, Dam KA, Bjorkman PJ

EMDB-71516:
SARS-CoV-2 Wuhan-Hu-1/BA.1/Delta spike heterotrimer (HT3) with 1-'up' RBD
Method: single particle / : Fan C, Dam KA, Bjorkman PJ

EMDB-44724:
SARS-CoV-2 spike HexaPro protein in complex with T0A trimeric antagonist
Method: single particle / : Young T

EMDB-44725:
SARS-CoV-2 spike HexaPro protein in complex with T3A trimeric antagonist
Method: single particle / : Young T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more