[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 92 items for (author: hsu & ns)

EMDB-71685:
Cryo-EM structure of human NXPE1
Method: single particle / : Zhang H, Li F, Piper D, Min X

EMDB-49984:
Consensus refinement of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49991:
Focused refinement of PP2Ac repeat 1 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-64214:
Complex of GTP cyclohydrolase with GTP
Method: single particle / : Wang YL, Hsu NS, Li TL

EMDB-49985:
Focused refinement of PP2Ac repeats 3 and 4 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49986:
Focused refinement of PP2Ac repeat 4 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49987:
Focused refinement of PP2Ac repeats 2 and 3 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49988:
Focused refinement of PP2Ac repeat 3 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49989:
Focused refinement of PP2Ac repeats 1 and 2 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49990:
Focused refinement of PP2Ac repeat 2 of the CCDC6-PP2Ac complex
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

PDB-9qtj:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-49892:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-49893:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-49966:
CryoEM structure of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

PDB-9o04:
CryoEM structure of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49974:
Focused refinement of FBXO42-CCDC6-PP2Ac degradasome PP2Ac repeat4
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49975:
Focused refinement of PP2Ac repeats 3 and 4 in FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49976:
Focused refinement of PP2Ac repeats 2, 3, & of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49977:
Focused refinement of PP2Ac repeats 2 and 3 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49978:
Focused refinement of PP2Ac repeats 1, 2, 3 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49979:
Focused refinement of PP2Ac repeats 1 and 2 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49980:
Focused refinement of PP2Ac repeat 1 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49981:
Focused refinement of PP2Ac repeat3 and 1 FBXO42 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49982:
Focused refinement of PP2Ac repeat 3 and 2 FBXO42 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49983:
Consensus map for the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49992:
CryoEM structure of the CCDC6-PP2Ac multimer
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49119:
PROTAC-induced IRE1 ternary complex
Method: single particle / : Du J, Johnson M, Azumaya C, Rohou A, Hsu PL, Ashkenazi A

PDB-9n88:
PROTAC-induced IRE1 ternary complex
Method: single particle / : Du J, Johnson M, Azumaya C, Rohou A, Hsu PL, Ashkenazi A

EMDB-72209:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-72215:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449; G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-45579:
Yeast 26S proteasome non-substrate-engaged (S1 state)
Method: single particle / : Arkinson C, Gee CL, Martin A

PDB-9cgc:
Yeast 26S proteasome non-substrate-engaged (S1 state)
Method: single particle / : Arkinson C, Gee CL, Martin A

EMDB-61766:
Cryo-EM structure of neutralizing antibody 8G3 in complex with BA.1 RBD
Method: single particle / : Li J, Li H

PDB-9js4:
Cryo-EM structure of neutralizing antibody 8G3 in complex with BA.1 RBD
Method: single particle / : Li J, Li H

EMDB-42917:
De novo designed KWOCA 18 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42919:
De novo designed KWOCA 18 nanoparticle - Assembly in D5 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42921:
De novo designed KWOCA 70 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42924:
De novo designed KWOCA 70 nanoparticle - Assembly in D3 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42291:
Structure of the human INTS9-INTS11-BRAT1 complex
Method: single particle / : Lin M, Tong L

EMDB-42292:
Structure of the Drosophila IntS11-CG7044(dBRAT1) complex
Method: single particle / : Lin M, Tong L

PDB-8uib:
Structure of the human INTS9-INTS11-BRAT1 complex
Method: single particle / : Lin M, Tong L

PDB-8uic:
Structure of the Drosophila IntS11-CG7044(dBRAT1) complex
Method: single particle / : Lin M, Tong L

EMDB-42589:
Prototypic SARS-CoV-2 spike (containing K417) in the closed conformation
Method: single particle / : Geng Q, Liu B, Li F

EMDB-42590:
Prototypic SARS-CoV-2 spike (containing K417) in the open conformation
Method: single particle / : Geng Q, Liu B, Li F

EMDB-42591:
Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
Method: single particle / : Geng Q, Liu B, Li F

EMDB-42592:
Prototypic SARS-CoV-2 spike (containing V417) in the open conformation
Method: single particle / : Geng Q, Liu B, Li F

PDB-8uul:
Prototypic SARS-CoV-2 spike (containing K417) in the closed conformation
Method: single particle / : Geng Q, Liu B, Li F

PDB-8uum:
Prototypic SARS-CoV-2 spike (containing K417) in the open conformation
Method: single particle / : Geng Q, Liu B, Li F

PDB-8uun:
Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
Method: single particle / : Geng Q, Liu B, Li F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more