[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 116 items for (author: hong & xy)

EMDB-63935:
structure of human KCNQ1-KCNE1-CaM complex
Method: single particle / : Hou PP, Zhang J, Wan SY, Cheng XY, Zhong L, Hu B

EMDB-64038:
structure of human KCNQ1-KCNE1-CaM complex with PIP2
Method: single particle / : Hou PP, Zhang J, Wan SY, Cheng XY, Zhong L, Hu B

EMDB-39670:
Structure of a murine monoclonal antibody Fab5 targeting Epstein-Barr virus gB
Method: single particle / : Fang XY, Sun C, Zeng MS, Liu Z

EMDB-63594:
DjCas13d-crRNA binary complex
Method: single particle / : Chen XY, Huang HD

EMDB-63595:
CasRx-crRNA binary complex
Method: single particle / : Chen XY, Huang HD

EMDB-63597:
DjCas13d-crRNA-target RNA1 ternary complex
Method: single particle / : Chen XY, Huang HD

EMDB-63598:
DjCas13d-crRNA-target RNA2 ternary complex
Method: single particle / : Chen XY, Huang HD

EMDB-63601:
apo-DjCas13d
Method: single particle / : Chen XY, Huang HD

EMDB-63602:
Conformation 2 of the DjCas13d-crRNA-target RNA2 ternary complex
Method: single particle / : Chen XY, Huang HD

EMDB-63718:
CasRx-crRNA-target RNA ternary complex
Method: single particle / : Chen XY, Huang HD

EMDB-62991:
Clostridium botulinum ncRNA homo-dimer
Method: single particle / : Jia XY, Wang L, Su ZM

EMDB-38646:
Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state
Method: single particle / : Wang L, Xie JH, Zhang C, Zou J, Huang ZR, Shang ST, Chen XY, Yang Y, Liu J, Dong HH, Huang DM, Su ZM

EMDB-38647:
Comamonas testosteroni KF-1 circularly permuted group II intron 1S state
Method: single particle / : Wang L, Xie JH, Zhang C, Zou J, Huang ZR, Shang ST, Chen XY, Yang Y, Liu J, Dong HH, Huang DM, Su ZM

EMDB-38649:
Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state
Method: single particle / : Wang L, Xie JH, Zhang C, Zou J, Huang ZR, Shang ST, Chen XY, Yang Y, Liu J, Dong HH, Huang DM, Su ZM

EMDB-60272:
Structure of Epstein-Barr virus major glycoprotein gp350 in complex with the receptor CR2
Method: single particle / : Fang XY, Sun C, Liu Z, Zeng MS

EMDB-46049:
Cryo-EM structure of MRV outer shell
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46053:
Cryo-EM structure of MRV full core
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46054:
Cryo-EM structure of MRV virion
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47313:
Subtomogram averaging of MRV core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47314:
Subtomogram averaging for MRV empty core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47315:
Subtomogram averaging of MRV star core from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47316:
Subtomogram averaging of MRV virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47317:
Subtomogram averaging of MRV virion vertex
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47318:
Subtomogram averaging of MRV empty virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47319:
Subtomogram averaging of MRV outer shell from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47320:
CryoEM structure of MRV empty virion 48 h post infection
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47321:
CryoEM structure of MRV empty core without turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47322:
CryoEM structure of MRV empty core with turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-37072:
Cryo-EM structure of dimeric ATP-TTR-3
Method: single particle / : Chen XY, Jia GW, Su ZM

EMDB-42953:
CryoEM Structure of Diffocin - precontracted - Collar
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42956:
CryoEM Structure of Diffocin - precontracted - Baseplate - focused refinement on triplex region
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42957:
CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C6 symmetry
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42958:
CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C3 symmetry
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42959:
CryoEM Structure of Diffocin - precontracted - Trunk
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42960:
CryoEM Structure of Diffocin - postcontracted - Trunk
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42961:
CryoEM Structure of Diffocin - postcontracted - Collar - transitional state
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42962:
CryoEM Structure of Diffocin - postcontracted - Collar - final state
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42963:
CryoEM Structure of Diffocin - postcontracted - Baseplate - transitional state
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42964:
CryoEM Structure of Diffocin - postcontracted - Baseplate - final state
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-36840:
3-Methylcrotonyl-CoA Carboxylase in MCCD state with Acetyl CoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36704:
Human 3-methylcrotonyl-CoA carboxylase in MCCU state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36705:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36706:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H1 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-37249:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Method: single particle / : Fang XY, Zhao GX, Zeng MS, Liu Z

EMDB-38143:
Structure of apoferritin
Method: single particle / : Zhao QY, Hong XY, Cong Y

EMDB-36128:
Human MCC in MCCU state
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36136:
Human MCC in MCCD state
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36850:
SARS-CoV-2 Omicron BA.1 spike protein in complex with a self-assembling trivalent nanobody Tr67
Method: single particle / : Jiang XY, Qin Q, Qian JQ, Zhu HX, Huang Q

EMDB-37919:
Cryo-EM structure of DSR2 apo complex
Method: single particle / : Zhang JT, Jia N, Liu XY

EMDB-37920:
Cryo-EM structure of DSR2 apo (partial) complex
Method: single particle / : Zhang JT, Jia N, Liu XY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more