[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,182 items for (author: ho & mc)

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-64647:
Cryo-EM Structure of the Vaccinia Virus Entry/Fusion Complex (EFC) Lacking the F9 Subunit
Method: single particle / : Wang CH, Lin CSH, Chang W

EMDB-64648:
Cryo-EM Structure of the Vaccinia Virus Entry/Fusion Complex (EFC) Including the F9 Subunit
Method: single particle / : Wang CH, Lin CSH, Chang W

EMDB-72108:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P, Fischer E

PDB-9q0w:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr1:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr2:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-55390:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-55391:
In situ cryo-electron tomogram of a mouse rod photoreceptor cell containing the centriolar luminal distal ring
Method: electron tomography / : Mukherjee S, Daraspe J, Genoud C, Hamel V, Guichard P

EMDB-48572:
C12 local connector reconstruction of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48573:
C6 local connector reconstruction of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48599:
Connector structure of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-48600:
Helical tail assembly of phage JohannRWettstein (Bas63)
Method: helical / : Hodgkinson-Bean J

PDB-9mt4:
Connector structure of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

PDB-9mt5:
Helical tail assembly of phage JohannRWettstein (Bas63)
Method: helical / : Hodgkinson-Bean J

EMDB-49251:
Icosahedral capsid assembly of phage JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49262:
C3 baseplate consensus reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49263:
C6 baseplate consensus reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49264:
C3 baseplate puncture appratus focussed reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49265:
C3 baseplate wedge focussed reconstruction of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49270:
C3 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49271:
C3 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49281:
Composite baseplate asymmetric unit of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49282:
C3 baseplate/tail composite map of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49284:
C6 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49292:
C6 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-49482:
C6 baseplate/tail/fibers composite map of JohannRWettstein (Bas63)
Method: single particle / : Hodgkinson-Bean J

EMDB-70077:
Plasmodium falciparum 20S proteasome bound to inhibitor 159
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

EMDB-70078:
Plasmodium falciparum 20S proteasome bound to inhibitor 296
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

PDB-9o3e:
Plasmodium falciparum 20S proteasome bound to inhibitor 159
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

PDB-9o3f:
Plasmodium falciparum 20S proteasome bound to inhibitor 296
Method: single particle / : Han Y, Deng X, Ray S, Phillips M

EMDB-51847:
80S Ribosome Average for EMPIAR-11830
Method: subtomogram averaging / : Khavnekar S

EMDB-55393:
Subtomogram average of the hook density between microtubule doublets/triplets
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Van der Stappen P, Mueller A, Stearns T, Engel BD

EMDB-55394:
Subtomogram average of the luminal distal ring from MTEC centrioles
Method: subtomogram averaging / : McCafferty C, van den Hoek HG, Righetto RD, Mueller A, Van der Stappen P, Stearns T, Engel BD

EMDB-48331:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

PDB-9mkn:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

EMDB-55386:
Tomogram of a mouse tracheal epithelial cell containing the C2CD3 luminal ring protein
Method: electron tomography / : van den Hoek HG, McCafferty C, Righetto RD, Stearns T, Engel BD

EMDB-52758:
Cryo-EM structure of CAK-CDK11
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-52759:
Cryo-EM structure of CAK-CDK2-cyclin A2 bound to AMP-PNP (locally refined map)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

EMDB-52760:
Cryo-EM structure of CAK-CDK2 (determined in the presence of ADP-nitrate)
Method: single particle / : Cushing VI, Greber BJ, McGeoch AJS, Feng J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more