[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 29,639 items for (author: ho & c)

EMDB-70376:
The structure of a Bacterial Cyanide Dihydratase from Bacillus safensis PER-URP-08
Method: single particle / : Justo Arevalo S, Valle-Riestra F V, Balan A, Chuck CS

EMDB-70421:
The structure of a Fungal Cyanide Hydratase from Gloeocercospora sorghi
Method: single particle / : Justo Arevalo S, Valle-Riestra F V, Balan A, Farah CS

PDB-9odt:
The structure of a Bacterial Cyanide Dihydratase from Bacillus safensis PER-URP-08
Method: single particle / : Justo Arevalo S, Valle-Riestra F V, Balan A, Chuck CS

PDB-9ofa:
The structure of a Fungal Cyanide Hydratase from Gloeocercospora sorghi
Method: single particle / : Justo Arevalo S, Valle-Riestra F V, Balan A, Farah CS

EMDB-49179:
Cryo-EM structure of AMPPNP bound human phosphoribosylformylglycinamidine synthase
Method: single particle / : Sharma N, French JB

PDB-9n9w:
Cryo-EM structure of AMPPNP bound human phosphoribosylformylglycinamidine synthase
Method: single particle / : Sharma N, French JB

EMDB-65918:
Structure of HCMV UL33 in complex with human Gs protein
Method: single particle / : Tsutsumi N, Suzuki S, Nishikawa K, Fujiyoshi Y

PDB-9wey:
Structure of HCMV UL33 in complex with human Gs protein
Method: single particle / : Tsutsumi N, Suzuki S, Nishikawa K, Fujiyoshi Y

EMDB-55526:
Staphylococcus aureus 70S initiation complex with a natural mRNA
Method: single particle / : Bahena Ceron R, Klaholz B, Marzi S

PDB-9t4r:
Staphylococcus aureus 70S initiation complex with a natural mRNA
Method: single particle / : Bahena Ceron R, Klaholz B, Marzi S

EMDB-55835:
Lysed Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55839:
Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55841:
Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55842:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55846:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55848:
Roseiflexus cell from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55851:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55852:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55853:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55854:
Calidithermus chliarophilus cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55855:
Deinococcus aquatilis cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55861:
Roseiflexus castenholzii cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55862:
Roseiflexus castenholzii cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55870:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55871:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55872:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55873:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-72942:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-72948:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9ygu:
Flagella filament structure in H. pylori composed of flagellin FlaA
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

PDB-9yh1:
Structure of flagellin FlaB filament in H. pylori
Method: single particle / : Kumar R, Yu H, Tachiyama S, Liu J

EMDB-75514:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

PDB-10xu:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

EMDB-53567:
An auto inhibitory loop in the MiDAC histone deacetylase complex
Method: single particle / : Fairall L, Schwabe JWR

PDB-9r4i:
An auto inhibitory loop in the MiDAC histone deacetylase complex
Method: single particle / : Fairall L, Schwabe JWR

EMDB-70223:
Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

PDB-9o8d:
Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-70260:
Human MPC1-2 Complex
Method: single particle / : Qi X, Sun Y, Wang Y

EMDB-49198:
Cryo-EM structure of ternary complex of human phosphoribosylglycinamidine synthase with the intermediate (iminophosphate) and ADP bound at the synthase site.
Method: single particle / : Sharma N, French JB

EMDB-49207:
Cryo-EM structure of quaternary complex of human phosphoribosylglycinamidine synthase with thioester intermediate bound (at glutaminase site) and AMPPNP and FGAR (at synthase site).
Method: single particle / : Sharma N, French JB

EMDB-73489:
Computationally Designed Tetramer of Apo-HC4 (C1 symmetry)
Method: single particle / : Eng VH, Narehood SM, Tezcan FA

PDB-9ytq:
Computationally Designed Tetramer of Apo-HC4 (C1 symmetry)
Method: single particle / : Eng VH, Narehood SM, Tezcan FA

EMDB-72207:
Cryo EM structure of elk ACE2 in complex with SARS-CoV-2 spike trimer
Method: single particle / : Ye K, Tao YJ, Wan XF

EMDB-72208:
Cryo EM structure of elk ACE2 in complex with XBB 1.5 spike RBD
Method: single particle / : Ye K, Tao YJ, Wan XF

EMDB-48638:
Structure of Human SLC33A1 in complex with oxidized glutathione
Method: single particle / : Gad M, Hite RK

EMDB-48699:
Consensus reconstitution of SLC33A1 in complex with a Fv clasp
Method: single particle / : Gad M, Hite RK

EMDB-54951:
Cryo-EM structure of Human Apoferritin at pH 3.5
Method: single particle / : Skalidis I, Semchonok DA, Tueting C, Hamdi F, Kastritis PL

EMDB-54952:
Cryo-EM structure of Human Apoferritin at pH 4
Method: single particle / : Skalidis I, Semchonok DA, Tueting C, Hamdi F, Kastritis PL

EMDB-54953:
Cryo-EM structure of Human Apoferritin at pH 5
Method: single particle / : Skalidis I, Semchonok DA, Tueting C, Hamdi F, Kastritis PL

EMDB-54954:
Cryo-EM structure of Human Apoferritin at pH 7
Method: single particle / : Skalidis I, Semchonok DA, Tueting C, Hamdi F, Kastritis PL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more