[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 33,672 items for (author: he & b)

EMDB-62901:
PSI trimer of Synechocystis sp. PCC 6803
Method: single particle / : Shen LL, Han GY

EMDB-70507:
HCoV-229E S2P bound by one DH1533 Fab, consensus map
Method: single particle / : Wrapp D

EMDB-70508:
HCoV-229E S2P bound by one DH1533 Fab, focused map
Method: single particle / : Wrapp D

EMDB-60812:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60813:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60815:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60817:
Cryo-EM Structure of rRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60819:
Cryo-EM Structure of CRISPR
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-66729:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-66731:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9irf:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9irg:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9iri:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9xcf:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

PDB-9xcg:
Cryo-EM structure of csy3 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

EMDB-73993:
Helical Reconstruction of the Human Cardiac F-Actin-Tropomyosin Complex
Method: helical / : Karpicheva O, Rynkiewicz MJ, Lehman W, Cammarato A

EMDB-73996:
Helical Reconstruction of the Complex of Pseudo-Acetylated Human Cardiac Actin (K326/328Q) and Tropomyosin
Method: helical / : Karpicheva O, Rynkiewicz MJ, Lehman W, Cammarato A

PDB-9zbl:
Helical Reconstruction of the Human Cardiac F-Actin-Tropomyosin Complex
Method: helical / : Karpicheva O, Rynkiewicz MJ, Lehman W, Cammarato A

PDB-9zbp:
Helical Reconstruction of the Complex of Pseudo-Acetylated Human Cardiac Actin (K326/328Q) and Tropomyosin
Method: helical / : Karpicheva O, Rynkiewicz MJ, Lehman W, Cammarato A

EMDB-53901:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53902:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53903:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53904:
Composite density map of Semliki Forest virus in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53905:
Icosahedral reconstruction of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53906:
Semliki Forest virus trimer 1 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53907:
Semliki Forest virus trimer 2 in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-53908:
Composite density map of Semliki Forest virus in complex with ApoER2 ligand-binding domain
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbq:
Semliki Forest virus trimer 1 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

PDB-9rbr:
Semliki Forest virus trimer 2 in complex with ApoER2 LA5
Method: single particle / : Song X, Du B, Yang D, Wang J, Huiskonen JT

EMDB-55905:
Cryo-EM structure of Z-DNA binding antibody Z-D11 in complex with left-handed Z-DNA
Method: single particle / : Chin DHR, Luo YB, Luo D

EMDB-55906:
Cryo-EM structure of Z22 mAb in complex with left-handed Z-DNA (dimer of trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

EMDB-55912:
Cryo-EM structure of Z22 antibody in complex with left-handed Z-DNA (trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

PDB-9tgn:
Cryo-EM structure of Z-DNA binding antibody Z-D11 in complex with left-handed Z-DNA
Method: single particle / : Chin DHR, Luo YB, Luo D

PDB-9tgo:
Cryo-EM structure of Z22 mAb in complex with left-handed Z-DNA (dimer of trimer)
Method: single particle / : Chin DHR, Luo YB, Luo D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more