[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 210 items for (author: hassan & z)

EMDB-47752:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

EMDB-47805:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

PDB-9e93:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

PDB-9e9v:
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Method: single particle / : Matsuo H, Skorupka KA

EMDB-70233:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70234:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70235:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70236:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8q:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8r:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8s:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8t:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-73044:
Cryo-EM structure of GroEL-gammaATP
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-73045:
GroEL Apoenzyme
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-73200:
Cryo-EM structure of GroEL-ADP
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9ykc:
Cryo-EM structure of GroEL-gammaATP
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9yke:
GroEL Apoenzyme
Method: single particle / : Zafar H, Glass KC, Malone KL

PDB-9ynj:
Cryo-EM structure of GroEL-ADP
Method: single particle / : Zafar H, Glass KC, Malone KL

EMDB-72062:
Polyclonal immune complex of Fab from mice sera binding the head of H5 HA after immunization with inactivated split A/bald eagle/FL/W22-134-OP/2022 Influenza virus vaccine adjuvanted with CpG
Method: single particle / : Andrade TG, Rodriguez AJ, Han J, Ward AB

EMDB-72063:
Polyclonal immune complex of Fab from mice sera binding the side of the head of H5 HA after immunization with inactivated split A/bald eagle/FL/W22-134-OP/2022 Influenza virus vaccine adjuvanted with CpG
Method: single particle / : Andrade TG, Rodriguez AJ, Han J, Ward AB

EMDB-72064:
Polyclonal immune complex of Fab from mice sera binding the esterase of H5 HA after immunization with inactivated split A/bald eagle/FL/W22-134-OP/2022 Influenza virus vaccine adjuvanted with CpG
Method: single particle / : Andrade TG, Rodriguez AJ, Han J, Ward AB

EMDB-72065:
Polyclonal immune complex of Fab from mice sera binding the top of N1 NA after immunization with inactivated split A/bald eagle/FL/W22-134-OP/2022 Influenza virus vaccine unadjuvanted
Method: single particle / : Andrade TG, Rodriguez AJ, Han J, Ward AB

EMDB-72066:
Polyclonal immune complex of Fab from mice sera binding the side of N1 NA after immunization with inactivated split A/bald eagle/FL/W22-134-OP/2022 Influenza virus vaccine adjuvanted with CpG
Method: single particle / : Andrade TG, Rodriguez AJ, Han J, Ward AB

EMDB-45938:
BmrCD in inward-facing conformation bound to Hoechsts
Method: single particle / : Tang Q, Mchaourab HS

EMDB-45939:
BmrCD in the inward-facing conformation bound to Hoechsts and lipids
Method: single particle / : Tang Q, Mchaourab HS

EMDB-45940:
BmrCD in the outward-facing conformation bound to Hoechsts
Method: single particle / : Tang Q, Mchaourab HS

PDB-9cup:
BmrCD in inward-facing conformation bound to Hoechsts
Method: single particle / : Tang Q, Mchaourab HS

PDB-9cur:
BmrCD in the inward-facing conformation bound to Hoechsts and lipids
Method: single particle / : Tang Q, Mchaourab HS

PDB-9cus:
BmrCD in the outward-facing conformation bound to Hoechsts
Method: single particle / : Tang Q, Mchaourab HS

EMDB-49728:
TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab
Method: single particle / : Saotome K, Franklin MC

PDB-9nrc:
TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab
Method: single particle / : Saotome K, Franklin MC

EMDB-49515:
Structure of R2 retrotransposon protein from Platysternon megacephalum initiating target-primed reverse transcription
Method: single particle / : Thawani A, Collins K, Nogales E

EMDB-49516:
Structure of R2 retrotransposon protein from Taeniopygia guttata initiating target-primed reverse transcription
Method: single particle / : Thawani A, Collins K, Nogales E

EMDB-49517:
Structure of R2 retrotransposon protein from Platysternon megacephalum after second strand nicking
Method: single particle / : Thawani A, Collins K, Nogales E

PDB-9nl2:
Structure of R2 retrotransposon protein from Platysternon megacephalum initiating target-primed reverse transcription
Method: single particle / : Thawani A, Collins K, Nogales E

PDB-9nl3:
Structure of R2 retrotransposon protein from Taeniopygia guttata initiating target-primed reverse transcription
Method: single particle / : Thawani A, Collins K, Nogales E

PDB-9nl4:
Structure of R2 retrotransposon protein from Platysternon megacephalum after second strand nicking
Method: single particle / : Thawani A, Collins K, Nogales E

EMDB-44874:
Cryo-EM structure of HCoV-HKU1 Spike glycoprotein (DDA state)
Method: single particle / : Jin M, Rini JM

EMDB-44875:
Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DAA state)
Method: single particle / : Jin M, Rini JM

EMDB-44876:
Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DAU state)
Method: single particle / : Jin M, Rini JM

EMDB-44877:
Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (AUU state)
Method: single particle / : Jin M, Rini JM

EMDB-44878:
Cryo-EM structure of HCoV-HKU1 Spike glycoprotein (DDD state)
Method: single particle / : Jin M, Rini JM

EMDB-44879:
Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (UUU state)
Method: single particle / : Jin M, Rini JM

EMDB-44880:
Cryo-EM structure of HCoV-HKU1 glycoprotein D1 (Down State, locally refined)
Method: single particle / : Jin M, Rini JM

EMDB-44884:
Cryo-EM Structure of HKU1 spike D1 Domain (Active state, locally refined)
Method: single particle / : Jin M, Rini JM

EMDB-44885:
Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Down_alt state, locally refined)
Method: single particle / : Jin M, Rini JM

EMDB-44886:
Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Active state, locally refined)
Method: single particle / : Jin M, Rini JM

EMDB-44887:
Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Up state, locally refined)
Method: single particle / : Jin M, Rini JM

EMDB-44888:
Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DDA state)
Method: single particle / : Jin M, Rini JM

EMDB-48803:
Cryo-EM structure of HCoV-HKU1 glycoprotein (mutant T31VPR34 to GGGG)
Method: single particle / : Jin M, Rini JM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more