[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 11,942 items for (author: hao & y)

EMDB-64791:
CryoEM structure of human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

PDB-9v5p:
Human DNMT1 (aa 698-1616) in complex with hemimethylated dsDNA and inhibitor DMT207
Method: single particle / : Li Z

EMDB-64869:
Cryo-EM structure of human TNFR1 DD filament
Method: helical / : Zhao K, Liu JP, Liu C, Yuan JY

EMDB-64870:
Cryo-EM structure of human RIPK1 DD filament
Method: helical / : Zhao K, Liu JP, Liu C, Yuan JY

EMDB-65047:
Helical assembly of TRADD death domain
Method: helical / : Liu J, Han Y

EMDB-65094:
Ternary complex of TNFR1-DD, TRADD-DD and RIPK1-DD
Method: single particle / : Liu J, Han Y, Zhao J, Gao J, Yuan J

PDB-9v9c:
Cryo-EM structure of human TNFR1 DD filament
Method: helical / : Zhao K, Liu JP, Liu C, Yuan JY

PDB-9v9e:
Cryo-EM structure of human RIPK1 DD filament
Method: helical / : Zhao K, Liu JP, Liu C, Yuan JY

PDB-9vin:
Ternary complex of TNFR1-DD, TRADD-DD and RIPK1-DD
Method: single particle / : Liu J, Han Y, Zhao J, Gao J, Yuan J

EMDB-61306:
Multidrug resistance-associated protein 2 in complex with SN-38G
Method: single particle / : Yun CH, Zhao P

PDB-9jb7:
Multidrug resistance-associated protein 2 in complex with SN-38G
Method: single particle / : Yun CH, Zhao P

EMDB-53235:
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

PDB-9qlv:
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40
Method: single particle / : Zhao H, Lukoyanova N, Selvaraj M, Jones J

EMDB-48049:
Octopus ribosome, empty 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

EMDB-48050:
Octopus ribosome, 60S (multibody)
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

EMDB-48051:
Octopus ribosome, 40S (multibody)
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

EMDB-65282:
Cryo-EM structure of ATP-bound Oryza sativa MRP5 with E1424Q mutation
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65283:
Cryo-EM structure of Oryza sativa multidrug resistance protein 5 (MRP5)
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65284:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state A
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65285:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state B
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrb:
Cryo-EM structure of ATP-bound Oryza sativa MRP5 with E1424Q mutation
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrc:
Cryo-EM structure of Oryza sativa multidrug resistance protein 5 (MRP5)
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vrd:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state A
Method: single particle / : Zou J, Zhang J, Liu Z

PDB-9vre:
Cryo-EM structure of rice multidrug resistance protein 5 (MRP5) with InsP6 in state B
Method: single particle / : Zou J, Zhang J, Liu Z

EMDB-65106:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

EMDB-65107:
Raw consensus map of Type II-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65108:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65109:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vj8:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

PDB-9vj9:
Type I-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vja:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vjb:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

PDB-9m7s:
At S1+2S3 trimer
Method: single particle / : Zhang SS

PDB-9m7w:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

EMDB-65950:
The structure of phycobilisome with a bicylindrical core from the cyanobacterium Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66291:
The cryo-EM structure of PBS rod from synechococous elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66294:
The cryo-EM structure of PBS core from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66296:
The cryo-EM structure of PBS from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66300:
The structure of phycobilisome rod from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66303:
The cryo-EM structure of PBS core from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-66304:
The cryo-EM structure of PBS from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

PDB-9wg7:
The structure of phycobilisome with a bicylindrical core from the cyanobacterium Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

PDB-9x69:
The structure of phycobilisome with a bicylindrical core from the cyanobacterium Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

PDB-9x6d:
The cryo-EM structure of phycobilisome rod from Synechococcus elongatus PCC 7942
Method: single particle / : Zheng ZG, Ma CY, Wang HR, Wang GP, Dong CX, Gao N, Zhao JD

EMDB-61338:
Multidrug resistance-associated protein 2 in complex with MK-571 and ATP
Method: single particle / : Yun CH, Zhao P

PDB-9jc0:
Multidrug resistance-associated protein 2 in complex with MK-571 and ATP
Method: single particle / : Yun CH, Zhao P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more