[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,708 items for (author: hao & y)

EMDB-75506:
Cryo-EM map of Ascl1-E12a in complex with NRCAM nucleosome without scFv
Method: single particle / : Zhou BR, Bai Y

EMDB-55775:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

EMDB-67054:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67055:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67183:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-67273:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9tby:
apo state of CydDC in nanodisc
Method: single particle / : Changbin Z, Yongbo L, Lili Y

PDB-9xno:
CydDC in nanodisc with AMP-PNP-bound
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xnp:
CydDC in nanodisc with ATP
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xsm:
CydDC in nanodisc with heme-bound I
Method: single particle / : Zhang C, Luo Y, Yang L

PDB-9xuo:
CydDC in nanodisc with heme-bound II
Method: single particle / : Zhang C, Luo Y, Yang L

EMDB-73720:
Mitochondrial Creatine Kinase in complex with uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

PDB-9z0p:
Mitochondrial Creatine Kinase in complex with uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

EMDB-66305:
Cryo-EM Structure of Parabacteroide phage PD491P1 Capsid
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66306:
Cryo-EM Structure of Parabacteroide phage PD491P1 head-to-tail interface
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66307:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C6 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-66308:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C3 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9ww9:
Cryo-EM Structure of Parabacteroide phage PD491P1 Capsid
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwa:
Cryo-EM Structure of Parabacteroide phage PD491P1 head-to-tail interface
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwb:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C6 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

PDB-9wwc:
Cryo-EM structure of the tail tip region of Parabacteroide phage PD491P1 (imposed with C3 symmetry)
Method: single particle / : Cai C, Wang A, Shao Q

EMDB-63485:
The consensus map of HBx-Smc5/6 ubiquitination complex
Method: single particle / : Tong C, Lili D, Hongshuai L, Jinhong Z, Qian X, Lanfeng W

EMDB-41497:
Structure of the H-lobe of human MED12
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-41500:
Structure of the kinase and central lobes of human CDK8 kinase module
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-65060:
Molecular mechanism of prostaglandin transporter SLCO2A1
Method: single particle / : Li YH, Zhou ZX, Zhu ZN, Chao YL, Qu QH

PDB-9vh9:
Molecular mechanism of prostaglandin transporter SLCO2A1
Method: single particle / : Li YH, Zhou ZX, Zhu ZN, Chao YL, Qu QH

EMDB-65122:
Cryo-EM structure of MST-OR complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

PDB-9vjt:
Cryo-EM structure of MST-OR complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-65681:
Structure of the averaged natural silk fibroin nanofibril
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65682:
Averaged map of fibroin in silkworm silk
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65705:
Tomogram of fibroin and sericin in silkworm silk
Method: electron tomography / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65706:
Tomogram of fibroin in silkworm silk
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-65708:
Tomogram of natural silk fibroin extracted from posterior silk glands
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more