[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 193 items for (author: gordon & s)

EMDB-70233:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70234:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-70235:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

EMDB-70236:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8q:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8r:
Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

PDB-9o8s:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Method: single particle / : Jo G, Ward AB

PDB-9o8t:
Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Method: single particle / : Jo G, Ward AB

EMDB-54692:
Cryo-EM structure of SARS CoV-2 RdRp S759A mutant in complex with 20-40mer RNA incorporating remdesivir
Method: single particle / : Oliva MF, Das K

EMDB-54693:
Cryo-EM structure of SARS CoV-2 RdRp wild-type in complex with 20-40mer RNA incorporating Remdesivir
Method: single particle / : Oliva MF, Das K

EMDB-54694:
Cryo-EM structure of SARS CoV-2 RdRp S759A mutant in complex with 20-40mer RNA incorporating ATP
Method: single particle / : Oliva MF, Das K

EMDB-54695:
Cryo-EM structure of SARS CoV-2 RdRp wild-type in complex with 20-40mer RNA incorporating ATP
Method: single particle / : Oliva MF, Das K

PDB-9sao:
Cryo-EM structure of SARS CoV-2 RdRp S759A mutant in complex with 20-40mer RNA incorporating remdesivir
Method: single particle / : Oliva MF, Das K

PDB-9sap:
Cryo-EM structure of SARS CoV-2 RdRp wild-type in complex with 20-40mer RNA incorporating Remdesivir
Method: single particle / : Oliva MF, Das K

PDB-9saq:
Cryo-EM structure of SARS CoV-2 RdRp S759A mutant in complex with 20-40mer RNA incorporating ATP
Method: single particle / : Oliva MF, Das K

PDB-9sar:
Cryo-EM structure of SARS CoV-2 RdRp wild-type in complex with 20-40mer RNA incorporating ATP
Method: single particle / : Oliva MF, Das K

EMDB-72382:
Human antibody Fab MPV499 bound to hMPV DsCav-ES2
Method: single particle / : Esfahani BG, Mousa J, Khalil AM

EMDB-70793:
Human antibody Fab MPV498 bound to hMPV B2 post-fusion F
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

EMDB-71547:
Human antibody Fab MPV513 bound to hMPV DsCav-ES2
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

EMDB-71548:
Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein
Method: single particle / : Ghazi Esfahani N, Mousa J, Khalil AM

PDB-9os5:
Human antibody Fab MPV498 bound to hMPV B2 post-fusion F
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

PDB-9pdx:
Human antibody Fab MPV513 bound to hMPV DsCav-ES2
Method: single particle / : Ghazi Esfahani B, Mousa J, Khalil AM

PDB-9pdy:
Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein
Method: single particle / : Ghazi Esfahani N, Mousa J, Khalil AM

EMDB-47928:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-48284:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9ecz:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with human neutralizing antibody WRAIR-2008 (focused refinement of NTD and WRAIR-2008)
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

PDB-9mi3:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008
Method: single particle / : Jensen JL, Thomas PV, Joyce MG

EMDB-45474:
Structure of MORC2 PD mutant binding to AMP-PNP
Method: single particle / : Tan W, Shakeel S

EMDB-45475:
MORC2 ATPase dead mutant - S87A
Method: single particle / : Tan W, Shakeel S

EMDB-45476:
MORC2 PD mutant with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-45477:
MORC2 ATPase structure
Method: single particle / : Tan W, Shakeel S

EMDB-45478:
MORC2 ATPase with DNA
Method: single particle / : Tan W, Shakeel S

PDB-9cdf:
Structure of MORC2 PD mutant binding to AMP-PNP
Method: single particle / : Tan W, Shakeel S

PDB-9cdg:
MORC2 ATPase dead mutant - S87A
Method: single particle / : Tan W, Shakeel S

PDB-9cdh:
MORC2 PD mutant with DNA
Method: single particle / : Tan W, Shakeel S

PDB-9cdi:
MORC2 ATPase structure
Method: single particle / : Tan W, Shakeel S

PDB-9cdj:
MORC2 ATPase with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-50049:
Broad substrate scope C-C oxidation in cyclodipeptides catalysed by a flavin-dependent filament
Method: helical / : Sutherland E, Sundaramoorthy R, Czekster CM

PDB-9exv:
Broad substrate scope C-C oxidation in cyclodipeptides catalysed by a flavin-dependent filament
Method: helical / : Sutherland E, Sundaramoorthy R, Czekster CM

EMDB-28966:
CryoEM map of de novo designed oligomeric protein C4-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28967:
CryoEM map of de novo designed oligomeric protein C4-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28968:
CryoEM map of de novo designed oligomeric protein C6-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28969:
CryoEM map of de novo designed oligomeric protein C6-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28970:
CryoEM map of de novo designed oligomeric protein C6-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28971:
CryoEM map of de novo designed oligomeric protein C8-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28972:
CryoEM map of de novo designed oligomeric protein C8-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28973:
CryoEM map of de novo designed oligomeric protein C4-81
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28974:
CryoEM map of designed oligomeric protein C4-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-40261:
DDB1/CRBN in complex with ARV-471 and the ER ligand-binding domain
Method: single particle / : Digianantonio K, Drulyte I, Gough S, Bekes M, Taylor I

EMDB-29330:
N332-GT5 SOSIP in complex with base polyclonal Fabs isolated at day 42 from protein immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more