[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 163 items for (author: frost & a)

EMDB-40940:
TRPV1 in Nanodisc bound with lysophosphatidic acid in all four monomers

EMDB-40941:
TRPV1 in Nanodisc not bound with lysophosphatidic acid (apo)

EMDB-40949:
TRPV1 in nanodisc bound with one LPA in one monomer

EMDB-40951:
TRPV1 in nanodisc bound with two LPA molecules in opposite monomers

EMDB-41005:
TRPV1 in nanodisc bound with 2 LPA molecules in neighboring monomers

EMDB-41006:
TRPV1 in nanodisc bound with 3 LPA molecules

EMDB-41847:
TRPV1 in nanodisc bound with diC8-PIP2 in the dilated state

EMDB-41848:
TRPV1 in nanodisc bound with diC8-PIP2 in the closed state

EMDB-41855:
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 1 (monomer)

EMDB-41857:
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 2 (monomer)

EMDB-41864:
TRPV1 in nanodisc bound with empty vanilloid binding pocket at 4C

EMDB-41866:
TRPV1 in nanodisc bound with empty vanilloid binding pocket at 25C

EMDB-41873:
TRPV1 in nanodisc bound with PIP2-Br4

EMDB-41879:
TRPV1 in nanodisc bound with PI-Br4, consensus structure

PDB-8t0c:
TRPV1 in Nanodisc bound with lysophosphatidic acid in all four monomers

PDB-8t0e:
TRPV1 in Nanodisc not bound with lysophosphatidic acid (apo)

PDB-8t0y:
TRPV1 in nanodisc bound with one LPA in one monomer

PDB-8t10:
TRPV1 in nanodisc bound with two LPA molecules in opposite monomers

PDB-8t3l:
TRPV1 in nanodisc bound with 2 LPA molecules in neighboring monomers

PDB-8t3m:
TRPV1 in nanodisc bound with 3 LPA molecules

PDB-8u2z:
TRPV1 in nanodisc bound with diC8-PIP2 in the dilated state

PDB-8u30:
TRPV1 in nanodisc bound with diC8-PIP2 in the closed state

PDB-8u3a:
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 1 (monomer)

PDB-8u3c:
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 2 (monomer)

PDB-8u3j:
TRPV1 in nanodisc bound with empty vanilloid binding pocket at 4C

PDB-8u3l:
TRPV1 in nanodisc bound with empty vanilloid binding pocket at 25C

PDB-8u43:
TRPV1 in nanodisc bound with PIP2-Br4

PDB-8u4d:
TRPV1 in nanodisc bound with PI-Br4, consensus structure

EMDB-18657:
PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1

EMDB-41617:
CryoEM structure of PI3Kalpha

PDB-8tu6:
CryoEM structure of PI3Kalpha

EMDB-26977:
CryoEM structure of human S-OPA1 assembled on lipid membrane in membrane-adjacent state

EMDB-26984:
CryoEM structure of human S-OPA1 assembled on lipid membrane in membrane-distal state

PDB-8ct1:
CryoEM structure of human S-OPA1 assembled on lipid membrane in membrane-adjacent state

PDB-8ct9:
CryoEM structure of human S-OPA1 assembled on lipid membrane in membrane-distal state

EMDB-28540:
BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core

EMDB-28541:
BG505 UFO trimer map reconstructed from BG505 UFO-E2p-L4P nanoparticle by localized reconstruction

EMDB-28542:
BG505 UFO-10GS-I3-01v9-L7P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core

EMDB-28543:
BG505 UFO trimer map reconstructed from BG505 UFO-10GS-I3-01v9-L7P nanoparticle by localized reconstruction

PDB-8eqn:
BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core

EMDB-25765:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain native virion

EMDB-25772:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with inhibitor 11526092

EMDB-25773:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with pleconaril

EMDB-25774:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526091 (no/low occupancy-no inhibitor modeled)

EMDB-25776:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526093 (no/low occupancy-no inhibitor modeled)

EMDB-27991:
CryoEM reconstruction of membrane-bound, left-handed CHMP1B+IST1 filament with brominated SDPC probe

EMDB-28694:
CryoEM reconstruction of membrane-bound, right-handed CHMP1B+IST1 with brominated SDPC probe

EMDB-28695:
CryoEM reconstruction of membrane-bound, left-handed CHMP1B+IST1 filament with brominated POPS probe

EMDB-28696:
CryoEM reconstruction of membrane-bound, right-handed CHMP1B+IST1 filament with brominated POPS probe

EMDB-28697:
CryoEM reconstruction of membrane-bound, left-handed CHMP1B+IST1 filament with brominated PIP2 probe

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more