[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 127 items for (author: fedor & j)

EMDB-46948:
Structure of URAT1 with no external ligand added
Method: single particle / : Suo Y, Fedor JG, Lee SY

EMDB-46949:
Structure of URAT1 in complex with benzbromarone
Method: single particle / : Suo Y, Fedor JG, Lee SY

EMDB-46950:
Structure of URAT1 in complex with lesinurad
Method: single particle / : Suo Y, Fedor JG, Lee SY

EMDB-46951:
Structure of URAT1 in complex with TD-3
Method: single particle / : Suo Y, Fedor JG, Lee SY

PDB-9dk9:
Structure of URAT1 with no external ligand added
Method: single particle / : Suo Y, Fedor JG, Lee SY

PDB-9dka:
Structure of URAT1 in complex with benzbromarone
Method: single particle / : Suo Y, Fedor JG, Lee SY

PDB-9dkb:
Structure of URAT1 in complex with lesinurad
Method: single particle / : Suo Y, Fedor JG, Lee SY

PDB-9dkc:
Structure of URAT1 in complex with TD-3
Method: single particle / : Suo Y, Fedor JG, Lee SY

EMDB-52642:
Consensus map of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-52647:
Focused refinement of the large ribosomal subunit of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-52648:
Postprocessed map of the focused refinement of the small ribosomal subunit body of a MLSb sensitive S. aureus strain "KES34"
Method: single particle / : Rivalta A, Yonath A

EMDB-52649:
Postprocessed map of the focused refinement of the small ribosomal subunit head of the MLSb sensitive S. aureus strain "KES34"
Method: single particle / : Rivalta A, Yonath A

EMDB-53066:
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-53067:
Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

PDB-9qeg:
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

PDB-9qeh:
Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
Method: single particle / : Rivalta A, Yonath A

EMDB-19675:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19676:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-44255:
Cryo-EM structure of the mouse TRPM8 channel in the ligand-free desensitized state
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44256:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist TC-I 2014
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44257:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist AMG2850
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44258:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist AMTB
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44259:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist TC-I 2014 and the cooling agonist C3
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44260:
Cryo-EM structure of the avian great tit TRPM8 channel in complex with the antagonist TC-I 2014
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44261:
Cryo-EM structure of the mouse TRPM8 channel in complex with PI(4,5)P2 and Ca2+
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-44262:
Cryo-EM structure of the mouse TRPM8 channel in complex with Ca2+ in the absence of PI(4,5)P2
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6d:
Cryo-EM structure of the mouse TRPM8 channel in the ligand-free desensitized state
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6e:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist TC-I 2014
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6f:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist AMG2850
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6g:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist AMTB
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6h:
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist TC-I 2014 and the cooling agonist C3
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6i:
Cryo-EM structure of the avian great tit TRPM8 channel in complex with the antagonist TC-I 2014
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6j:
Cryo-EM structure of the mouse TRPM8 channel in complex with PI(4,5)P2 and Ca2+
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

PDB-9b6k:
Cryo-EM structure of the mouse TRPM8 channel in complex with Ca2+ in the absence of PI(4,5)P2
Method: single particle / : Yin Y, Park CG, Zhang F, Fedor J, Feng S, Suo Y, Im W, Lee SY

EMDB-19576:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19582:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxh:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxx:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17216:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17229:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17236:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8ovj:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-41730:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin
Method: single particle / : Wright NJ, Lee SY

EMDB-41731:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in MSP2N2 nanodiscs, apo state
Method: single particle / : Wright NJ, Lee SY

EMDB-41732:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, consensus reconstruction
Method: single particle / : Wright NJ, Lee SY

EMDB-41733:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, subset reconstruction
Method: single particle / : Wright NJ, Lee SY

EMDB-41734:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with N-hydroxycytidine
Method: single particle / : Wright NJ, Lee SY

EMDB-41735:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with PSI-6206
Method: single particle / : Wright NJ, Lee SY

EMDB-41736:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT1 conformation
Method: single particle / : Wright NJ, Lee SY

EMDB-41737:
Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT3 conformation
Method: single particle / : Wright NJ, Lee SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more