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Showing 1 - 50 of 7,102 items for (author: du & m)


EMDB Unreleased entry

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES


EMDB Unreleased entry

EMDB-71850:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71851:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71852:
Mitochondria with amorphous calcium phosphate granules from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71853:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons.
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71859:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71860:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71861:
Sheet-like aggregate from 1 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71862:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71863:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71864:
Sheet-like aggregate from 20 DIV embryonic rat cortical neurons
Method: electron tomography / : Anderson EA, Ludtke SJ


EMDB Unreleased entry

EMDB-71733:
Focused map for TPR on CC1/4 and KLC-CC
Method: single particle / : ashaduzzaman M, Al-Bassam J


EMDB Unreleased entry

EMDB-71734:
Kinesin-1 heterotetramer
Method: single particle / : Ashaduzzaman M, Al-Bassam J

PDB-9pmb:
Kinesin-1 heterotetramer
Method: single particle / : Ashaduzzaman M, Al-Bassam J


EMDB Unreleased entry

EMDB-71730:
Focused map Coiled-coils 2 and 3
Method: single particle / : Ashaduzzaman M, Al-Bassam J


EMDB Unreleased entry

EMDB-71731:
focused map for Motor/Tails/CC0
Method: single particle / : Ashaduzzaman M, Al-Bassam J


EMDB Unreleased entry

EMDB-71732:
Focus map for motor/TPR/CC
Method: single particle / : Ashaduzzaman M, Al-Bassam J

EMDB-65347:
Structure of hTRPV1 complexed with LIQ
Method: single particle / : Min YM, Zonglin DZ, Yang YY

EMDB-65348:
Structure of hTRPV1 in apo state
Method: single particle / : Min YM, Zonglin DZ, Yang YY

EMDB-65349:
Structure of hTRPA1 complexed with LIQA
Method: single particle / : Min YM, Zonglin DZ, Yang YY

PDB-9vtz:
Structure of hTRPV1 complexed with LIQ
Method: single particle / : Min YM, Zonglin DZ, Yang YY

PDB-9vu0:
Structure of hTRPV1 in apo state
Method: single particle / : Min YM, Zonglin DZ, Yang YY

PDB-9vu1:
Structure of hTRPA1 complexed with LIQA
Method: single particle / : Min YM, Zonglin DZ, Yang YY

EMDB-75839:
E. coli SufE bound to SufBC2D
Method: single particle / : Chhikara N, Dunkle JA, Frantom PA

PDB-11mp:
E. coli SufE bound to SufBC2D
Method: single particle / : Chhikara N, Dunkle JA, Frantom PA

EMDB-77085:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77086:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77087:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77088:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77112:
Human Double-ring Hsp10
Method: single particle / : Page AA, Walti MA

EMDB-77126:
Human Single-ring Hsp10
Method: single particle / : Page AA, Walti MA

PDB-13kk:
Human Double-ring Hsp10
Method: single particle / : Page AA, Walti MA

PDB-13kw:
Human Single-ring Hsp10
Method: single particle / : Page AA, Walti MA

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-54627:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

EMDB-54956:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

PDB-9s6p:
Local refinement of a PSI monomer of A. marina NIES-2412
Method: single particle / : Consoli G, Leong HF

PDB-9sk3:
Trimeric photosystem I of Acaryochloris marina NIES-2412
Method: single particle / : Leong HF, Consoli G

EMDB-77092:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing by single particle analysis
Method: single particle / : Kopylov M, Ali M, Montabana EA, Paraan M

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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