[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 185 items for (author: dror & ro)

EMDB-71429:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71430:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71431:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71432:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71433:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71434:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa1:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa2:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa3:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa4:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa5:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa6:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

PDB-9zzo:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-70964:
CryoEM structure of Gi-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-70965:
CryoEM structure of Ggust-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71038:
Consensus map for Gi-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71040:
Local map of GPCR region of Gi-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71041:
Local map of Gi region for Gi-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71043:
Consensus map of Ggust-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71044:
Local map of GPCR region of Ggust-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-71046:
Local map of Ggust region of Ggust-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

PDB-9oxa:
CryoEM structure of Gi-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

PDB-9oxb:
CryoEM structure of Ggust-coupled TAS2R43 with aristolochic acid I
Method: single particle / : Kim Y, Gumpper RH, Roth BL

EMDB-70242:
Cryo-EM structure of CLC-ec1 at pH 7.5
Method: single particle / : Chien CT, Chiu W, Maduke M

EMDB-70243:
Cryo-EM structure of CLC-ec1 at pH 4.0
Method: single particle / : Chien CT, Chiu W, Maduke M

EMDB-70244:
Cryo-EM structure of CLC-ec1 at pH 3.0
Method: single particle / : Chien CT, Chiu W, Maduke M

EMDB-70245:
Cryo-EM structure of CLC-ec1 K131A at pH 7.5
Method: single particle / : Chien CT, Chiu W, Maduke M

PDB-9o95:
Cryo-EM structure of CLC-ec1 at pH 7.5
Method: single particle / : Chien CT, Chiu W, Maduke M

PDB-9o96:
Cryo-EM structure of CLC-ec1 at pH 4.0
Method: single particle / : Chien CT, Chiu W, Maduke M

PDB-9o97:
Cryo-EM structure of CLC-ec1 at pH 3.0
Method: single particle / : Chien CT, Chiu W, Maduke M

PDB-9o98:
Cryo-EM structure of CLC-ec1 K131A at pH 7.5
Method: single particle / : Chien CT, Chiu W, Maduke M

EMDB-51772:
Cryo-EM structure of Heterooligomeric Bacterioferritin
Method: single particle / : Stein D, Zalk R, Shahar A, Zarivach R, Frank GA

PDB-9h1u:
Cryo-EM structure of Heterooligomeric Bacterioferritin
Method: single particle / : Stein D, Zalk R, Shahar A, Zarivach R, Frank GA

EMDB-44865:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-44866:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bs9:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bsb:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-71819:
Cryo-EM structure of NCLX with calcium (class 3a)
Method: single particle / : Zhang J, Feng L

EMDB-71820:
Cryo-EM structure of NCLX with calcium (class 4a)
Method: single particle / : Zhang J, Feng L

EMDB-71821:
Cryo-EM structure of NCLX at low pH (class 4b)
Method: single particle / : Zhang J, Feng L

EMDB-71822:
Cryo-EM structure of NCLX without calcium (class 1)
Method: single particle / : Zhang J, Feng L

EMDB-71824:
Cryo-EM structure of NCLX without calcium (class 3)
Method: single particle / : Zhang J, Feng L

EMDB-71826:
Cryo-EM structure of NCLX with calcium (class 2a)
Method: single particle / : Zhang J, Feng L

PDB-9ps1:
Cryo-EM structure of NCLX with calcium (class 3a)
Method: single particle / : Zhang J, Feng L

PDB-9ps2:
Cryo-EM structure of NCLX with calcium (class 4a)
Method: single particle / : Zhang J, Feng L

PDB-9ps3:
Cryo-EM structure of NCLX at low pH (class 4b)
Method: single particle / : Zhang J, Feng L

PDB-9ps4:
Cryo-EM structure of NCLX without calcium (class 1)
Method: single particle / : Zhang J, Feng L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more