[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 36 items for (author: dong & xl)

EMDB-61131:
Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer
Method: single particle / : Tian H, Fung CP

EMDB-65163:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66328:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66330:
focused map for HSV-1 helicase-primase in complex with ssDNA, ADP and magnesium
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-64502:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

EMDB-61289:
Herpes simplex virus type 1 polymerase machinery in complex with duplex DNA, acyclovir triphosphate and calcium ions
Method: single particle / : Wu YQ, Chen XL, Jiang ZY, Li DY, Zhang ZY, Dong CJ

EMDB-37612:
Structure of 1,3-beta-glucan synthase component FKS1
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

EMDB-37614:
Cryo-EM structure of the beta-1,3-glucan synthase FKS1-Rho1 complex
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Yan CY, Deng D, Wang X

EMDB-39291:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in pyraclostrobin-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-39323:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in YF23694-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60256:
Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Method: single particle / : Ye Y, Li ZW, Yang GF

EMDB-60317:
Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Li ZW, Cui GR, Yang GF

EMDB-60320:
Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-60323:
Cryo-EM structure of YF23694-bound porcine bc1 complex
Method: single particle / : Wang YX, Sun JY, Cui GR, Yang GF

EMDB-38374:
Structure of acyltransferase GWT1 bound to palmitoyl-CoA
Method: single particle / : Dai XL, Li JL, Liu XZ, Deng D, Yan CY, Wang X

EMDB-38375:
Structure of acyltransferase GWT1 in complex with manogepix(APX001A)
Method: single particle / : Dai XL, Li JL, Liu XZ, Deng D, Wang X

EMDB-35202:
The cryo-EM structure of OsCyc1 tetramer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35206:
The cryo-EM structure of OsCyc1 hexamer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35207:
The cryo-EM structure of OsCyc1 dimer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35440:
The cryo-EM structure of OsCyc1 that complexed with GGPP
Method: single particle / : Ma XL, Xu HF, Jiang T

EMDB-35365:
Structure of an ancient TsaD-TsaC-SUA5-TcdA modular enzyme (TsaN)
Method: single particle / : Zhang ZL, Jin MQ, Yu ZJ, Chen W, Wang XL, Lei DS, Zhang WH

EMDB-33770:
In situ structure of polymerase complex of mammalian reovirus in the elongation state
Method: single particle / : Bao KY, Zhang XL, Li DY, Zhu P

EMDB-33154:
structure of a membrane-bound glycosyltransferase
Method: single particle / : Hu XL, Yang P, Zhang M, Liu XT, Yu HJ

EMDB-34115:
Structure of a mutated membrane-bound glycosyltransferase
Method: single particle / : Hu XL, Yang P, Zhang M, Liu XT, Yu HJ

EMDB-33778:
In situ structure of polymerase complex of mammalian reovirus in the pre-elongation state
Method: single particle / : Bao KY, Zhang XL, Li DY, Zhu P

EMDB-33779:
In situ structure of polymerase complex of mammalian reovirus in the reloaded state
Method: single particle / : Bao KY, Zhang XL, Li DY, Zhu P

EMDB-33780:
In situ structure of polymerase complex of mammalian reovirus in the core
Method: single particle / : Bao KY, Zhang XL, Li DY, Zhu P

EMDB-33787:
In situ structure of polymerase complex of mammalian reovirus in virion
Method: single particle / : Bao KY, Zhang XL, Li DY, Zhu P

EMDB-33901:
Structure of hIAPP-TF-type2
Method: helical / : Li DG, Zhang XL, Wang YW, Zhu P

EMDB-33902:
Structure of hIAPP-TF-type1
Method: helical / : Li DG, Zhang XL, Wang YW, Zhu P

EMDB-33903:
Structure of hIAPP-TF-type3
Method: helical / : Li DG, Zhang XL

EMDB-33039:
Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
Method: single particle / : Liu N, Dong XL, Qu GS, Wang J, Wang HW, Belfort M

EMDB-30532:
cryo-EM structure of a pre-catalytic group II intron RNP
Method: single particle / : Liu N, Dong XL

EMDB-30533:
Cryo-EM structure of a pre-catalytic group II intron
Method: single particle / : Liu N, Dong XL

EMDB-30540:
cryo-EM structure of a pre-catalytic group II intron complex
Method: single particle / : Liu N, Dong XL, Hu CX, Wang J, Wang HW, Belfort M

EMDB-30541:
cryo-EM structure of a pre-catalytic group II intron complex
Method: single particle / : Liu N, Dong XL, Hu CX, Wang J, Wang HW, Belfort M

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more