[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,036 items for (author: daniel & gr)

EMDB-45005:
Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45007:
Straight Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45008:
Paired Helical Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45009:
Straight Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxi:
Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxo:
Straight Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxq:
Paired Helical Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxr:
Straight Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-50580:
SOLIST cryo-tomogram of native left ventricle mouse heart muscle #1
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-50582:
SOLIST native mouse heart muscle tomogram #2
Method: electron tomography / : Erdmann PS, Nguyen HTD, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kalebic N, Coscia F

EMDB-19163:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19164:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19165:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19166:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rgz:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh0:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh1:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh2:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-16375:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

PDB-8c0y:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

EMDB-43712:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

EMDB-43713:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

PDB-8w0r:
Human EBP complexed with compound 1
Method: single particle / : Sun D, Masureel M

PDB-8w0s:
Human EBP complexed with compound 3a
Method: single particle / : Sun D, Masureel M

EMDB-42074:
Representative tomogram of Enterococcus faecium WT Com15
Method: electron tomography / : Hang HC, Park D

EMDB-42086:
Representative tomogram of Enterococcus faecium SagA complementation strain
Method: electron tomography / : Hang HC, Park D

EMDB-42087:
Representative tomogram of Enterococcus faecium SagA deletion strain
Method: electron tomography / : Hang HC, Park D

EMDB-19014:
PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Drulyte I, Hurdiss DL

EMDB-19015:
Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-19016:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 42H3 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-19017:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Drulyte I, Hurdiss DL

PDB-8r9w:
PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9x:
Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9y:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 42H3 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9z:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-18051:
Inward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18052:
Inward-facing, open2 proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18054:
Inward-facing, slack proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18055:
Outward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18057:
Outward-facing, open2 proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18059:
Outward-facing, slack proteoliposome complex I at 3.1 A. Initially purified in DDM.
Method: single particle / : Grba DN, Hirst J

EMDB-18066:
Inward-facing, open2 proteoliposome complex I at 2.9 A, after deactivation treatment. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18067:
Inward-facing, open1 proteoliposome complex I at 3.3 A, after deactivation treatment. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18068:
Outward-facing, open2 proteoliposome complex I at 2.6 A, after deactivation treatment. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18069:
Outward-facing, open1 proteoliposome complex I at 2.8 A, after deactivation treatment. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18138:
Inward-facing, closed proteoliposome complex I at 2.7 A. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18139:
Inward-facing, open2 proteoliposome complex I at 2.6 A. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18140:
Inward-facing, open1 proteoliposome complex I at 2.9 A. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18141:
Outward-facing, closed proteoliposome complex I at 2.5 A. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

EMDB-18142:
Outward-facing, open2 proteoliposome complex I at 2.6 A. Initially purified in LMNG.
Method: single particle / : Grba DN, Hirst J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more