[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 109 items for (author: cox & j)

EMDB-47547:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47548:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with beta-cyclodextrin
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47549:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with lysophosphatidylcholine
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47550:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 1
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47551:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 2
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47552:
Cryo-EM structure of mechanosensitive channel YnaI in DDPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47553:
Cryo-EM structure of MscS/YnaI chimera in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e62:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e63:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with beta-cyclodextrin
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e64:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with lysophosphatidylcholine
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e65:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 1
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e66:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 2
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e67:
Cryo-EM structure of mechanosensitive channel YnaI in DDPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e68:
Cryo-EM structure of MscS/YnaI chimera in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47837:
Murine norovirus allosteric escape mutant D348E
Method: single particle / : Smith TJ, Sherman M

EMDB-47838:
Murine norovirus allosteric V339I escape mutant + calcium
Method: single particle / : Smith TJ, Sherman MB

EMDB-47839:
MNV Allosteric escape mutant V339I + GCDCA
Method: single particle / : Smith TJ, Sherman M

EMDB-47840:
Murine Norovirus MNV-1 with allosteric escape mutation V339I
Method: single particle / : Smith TJ, Sherman M

PDB-9ean:
Murine norovirus allosteric escape mutant D348E
Method: single particle / : Smith TJ, Sherman M

PDB-9eao:
Murine norovirus allosteric V339I escape mutant + calcium
Method: single particle / : Smith TJ, Sherman MB

PDB-9eap:
MNV Allosteric escape mutant V339I + GCDCA
Method: single particle / : Smith TJ, Sherman M

PDB-9eaq:
Murine Norovirus MNV-1 with allosteric escape mutation V339I
Method: single particle / : Smith TJ, Sherman M

EMDB-42954:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-42955:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3u:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3v:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-44117:
Cryo-EM structure of Prefusion RSV F (RSV220975)
Method: single particle / : Yu X, Langedijk JPM

PDB-9b2x:
Cryo-EM structure of Prefusion RSV F (RSV220975)
Method: single particle / : Yu X, Langedijk JPM

EMDB-42981:
Prefusion-stabilized Respirovirus type 3 Fusion protein
Method: single particle / : Johnson NV, McLellan JS

PDB-8v5a:
Prefusion-stabilized Respirovirus type 3 Fusion protein
Method: single particle / : Johnson NV, McLellan JS

EMDB-38200:
Cryo-EM structure of OSCA1.2-liposome-inside-in open state
Method: single particle / : Zhang Y, Han Y

EMDB-38503:
Cryo-EM structure of OSCA1.2-liposome-inside-out closed state
Method: single particle / : Zhang Y, Han Y

EMDB-38611:
Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/open state
Method: single particle / : Zhang Y, Han Y

EMDB-38612:
Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/'desensitized' state
Method: single particle / : Zhang Y, Han Y

EMDB-38614:
Cryo-EM structure of OSCA1.2-DOPC-1:20-contracted1 state
Method: single particle / : Zhang Y, Han Y

EMDB-38615:
Cryo-EM structure of OSCA1.2-DOPC-1:20-contracted2 state
Method: single particle / : Zhang Y, Han Y

EMDB-38721:
Cryo-EM structure of OSCA1.2-DOPC-1:20-expanded state
Method: single particle / : Zhang Y, Han Y

EMDB-38722:
Cryo-EM structure of OSCA1.2-DOPC-1:50-betaCD state
Method: single particle / : Zhang Y, Han Y

EMDB-38723:
Cryo-EM structure of OSCA3.1-2E(R611E-R619E)-closed/open state
Method: single particle / : Zhang Y, Han Y

EMDB-38724:
Cryo-EM structure of OSCA3.1-2E(R611E-R619E)-closed/'desensitized' state
Method: single particle / : Zhang Y, Han Y

EMDB-38725:
Cryo-EM structure of OSCA3.1-GDN state
Method: single particle / : Zhang Y, Han Y

EMDB-38726:
Cryo-EM structure of OSCA3.1-liposome-inside-in state
Method: single particle / : Zhang Y, Han Y

EMDB-38727:
Cryo-EM structure of OSCA1.2-V335W-DDM state
Method: single particle / : Zhang Y, Han Y

EMDB-38728:
Cryo-EM structure of OSCA1.2-DOPC-1:50-contracted state
Method: single particle / : Zhang Y, Han Y

EMDB-38729:
Cryo-EM structure of OSCA1.2-DOPC-1:50-expanded state
Method: single particle / : Zhang Y, Han Y

EMDB-38730:
Cryo-EM structure of TMEM63B-Digitonin state
Method: single particle / : Zhang Y, Han Y

PDB-8xaj:
Cryo-EM structure of OSCA1.2-liposome-inside-in open state
Method: single particle / : Zhang Y, Han Y

PDB-8xng:
Cryo-EM structure of OSCA1.2-liposome-inside-out closed state
Method: single particle / : Zhang Y, Han Y

PDB-8xry:
Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/open state
Method: single particle / : Zhang Y, Han Y

PDB-8xs0:
Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/'desensitized' state
Method: single particle / : Zhang Y, Han Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more