[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 686 items for (author: choi & e)

EMDB-66538:
Structure of the old Killifish Ribosome (Consensus map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66539:
Structure of the old Killifish Ribosome (Small subunit focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66540:
Structure of the old Killifish Ribosome (head focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66541:
Structure of the old Killifish Ribosome (head focus-refined with partial mask)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66542:
Structure of the old Killifish Ribosome (Composite map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66543:
Structure of the old Killifish Proteasome
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66546:
Structure of the young Killifish Ribosome (Consensus map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66547:
Structure of the young Killifish Ribosome (small subunit focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66548:
Structure of the young Killifish Ribosome (head focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66549:
Structure of the young Killifish Ribosome (head focus-refined with partial mask)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66550:
Structure of the young Killifish Ribosome (Composite map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-64407:
Cryo-EM structure of the ZQ16-bound GPR84 receptor-Gi complex
Method: single particle / : Choi MK, Cho HS

EMDB-64807:
Cryo-EM structure of the GLPG1205-bound GPR84 receptor
Method: single particle / : Choi MK, Cho HS

PDB-9upy:
Cryo-EM structure of the ZQ16-bound GPR84 receptor-Gi complex
Method: single particle / : Choi MK, Cho HS

PDB-9v6t:
Cryo-EM structure of the GLPG1205-bound GPR84 receptor
Method: single particle / : Choi MK, Cho HS

EMDB-58507:
Discodermolide stabilised 14-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-58509:
Discodermolide stabilised 13-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-77899:
Consensus map of human FASN aligned by condensing wings (2M particles)
Method: single particle / : Li C, Choi W, Cheng Y

EMDB-56538:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

PDB-28iz:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

EMDB-65488:
Cryo-EM structure of LARS1:IARS1 complex
Method: single particle / : Kim Y, Kim JC, Kim DW, Kim J, Lee J, Kim S, Kang JY, Park HS

PDB-9w01:
Cryo-EM structure of LARS1:IARS1 complex
Method: single particle / : Kim Y, Kim JC, Kim DW, Kim J, Lee J, Kim S, Kang JY, Park HS

EMDB-69143:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69144:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69145:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pg:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23ph:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pi:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-75498:
KpSwz DUF4062 (Hexamer, catalytic mutant E97A)
Method: single particle / : Osinski A, Lopez VA, Tagliabracci VS

EMDB-75622:
KpSwz in complex with bacteriophage Bas14 Portal
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75626:
KpSwz DUF4062 (Tetramer, catalytic mutant E97A)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75638:
Human Brain RNA Vault Shoulder bound to ADPR, focused refinement (EMPIAR-10766)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75642:
RNA Vault waist region, focused refinement (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75647:
RNA Vault shoulder region with BAD bound, focused refinement (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75656:
RNA Vault with BAD bound (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75664:
RNA Vault cap (MVP/PARP4/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75731:
RNA Vault with ADPR bound (MVP/PARP4/TEP1 NADP sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75732:
RNA Vault Shoulder with ADPR bound, compact conformation, focused refinement (MVP/PARP4/TEP1 NADP sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75733:
RNA Vault Shoulder with ADPR bound, extended conformation, focused refinement (MVP/PARP4/TEP1 NADP sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75735:
RNA Vault bound to PARP4 MINT, focused refinement (MVP/PARP4/TEP1 NADP sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75744:
RNA Vault intermediate conformation (MVP/PARP4/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

EMDB-75745:
RNA Vault extended conformation (MVP/PARP4/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-10wc:
KpSwz DUF4062 (Hexamer, catalytic mutant E97A)
Method: single particle / : Osinski A, Lopez VA, Tagliabracci VS

PDB-11cq:
KpSwz in complex with bacteriophage Bas14 Portal
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11cv:
KpSwz DUF4062 (Tetramer, catalytic mutant E97A)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11dr:
Human Brain RNA Vault Shoulder bound to ADPR, focused refinement (EMPIAR-10766)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11dv:
RNA Vault waist region, focused refinement (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11ee:
RNA Vault shoulder region with BAD bound, focused refinement (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11eq:
RNA Vault with BAD bound (MVP/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

PDB-11fh:
RNA Vault cap (MVP/PARP4/TEP1 sample)
Method: single particle / : Osinski A, Tagliabracci VS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more