[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,192 items for (author: cho & y)

EMDB-53206:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53207:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53208:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53209:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53212:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53213:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53214:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53215:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53216:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-56081:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56094:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56109:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9qjp:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjq:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjr:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjs:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjv:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjx:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjy:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk0:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk1:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9tnb:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tns:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tpq:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-73523:
Cryo-EM structure of BA.5 spike, Open conformation
Method: single particle / : Ye G, Bu F, Li F

EMDB-73524:
Cryo-EM structure of BA.5 spike, Closed conformation
Method: single particle / : Ye G, Bu F, Li F

EMDB-73525:
Cryo-EM structure of BA.5 spike in complex with S22
Method: single particle / : Mou H, Gao B, Ye G, Bu F, Zhang L, Farzan M, Li F, Choe H

PDB-9yvi:
Cryo-EM structure of BA.5 spike in complex with S22
Method: single particle / : Mou H, Gao B, Ye G, Bu F, Zhang L, Farzan M, Li F, Choe H

EMDB-77899:
Consensus map of human FASN aligned by condensing wings (2M particles)
Method: single particle / : Li C, Choi W, Cheng Y

EMDB-59342:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-6
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59343:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-4
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59344:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-58
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-56538:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

PDB-28iz:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

EMDB-57794:
PLD-fold vaccinia virus endonuclease K4
Method: single particle / : Groger H, Burmeister WP, Tarbouriech N

PDB-30ie:
PLD-fold vaccinia virus endonuclease K4
Method: single particle / : Groger H, Burmeister WP, Tarbouriech N

EMDB-74755:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H91
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-52705:
Cryo-EM structure of PSII intermediate Psb27-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-52706:
Cryo-EM structure of PSII intermediate Psb32-PSII
Method: single particle / : Bohn S, Lo YK, Lambertz J, Furtges T, Rudack T, Nowaczyk MM, Schuller JM

EMDB-65978:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Tsujimoto E, Shiojiri N, Nagahata N, Yamashita K, Nishimasu H

EMDB-65979:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA in the post-strand exchange state
Method: single particle / : Hiraizumi M, Tsujimoto E, Shiojiri N, Nagahata N, Yamashita K, Nishimasu H

PDB-9whx:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Tsujimoto E, Shiojiri N, Nagahata N, Yamashita K, Nishimasu H

PDB-9why:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA in the post-strand exchange state
Method: single particle / : Hiraizumi M, Tsujimoto E, Shiojiri N, Nagahata N, Yamashita K, Nishimasu H

EMDB-63757:
SARS-CoV-2 spike-Crp5
Method: single particle / : Yang QX, Yang YL

EMDB-65041:
SARS-CoV-2 spike di-trimer of RBD and NTD
Method: single particle / : Yang QX, Yang YL

PDB-9mao:
SARS-CoV-2 spike-Crp5
Method: single particle / : Yang QX, Yang YL

PDB-9vfx:
SARS-CoV-2 spike di-trimer of RBD and NTD
Method: single particle / : Yang QX, Yang YL

EMDB-54637:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54638:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54639:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more