[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,778 items for (author: cheng & h)

EMDB-65652:
cryo-EM structure of PSII D1-S264V from Thermosynechococcus vestitus BP-1
Method: single particle / : Fan SB, Jiang HW, Kato K, Tsai PC, Jia AQ, Nakajima Y, Sugiura M, Shen JR

EMDB-65724:
cryo-EM structure of PSII PsbA3-S264V in complex with DCMU from Thermosynechococcus vestitus BP-1
Method: single particle / : Fan SB, Jiang HW, Kato K, Tsai PC, Jia AQ, Nakajima Y, Sugiura M, Shen JR

EMDB-65941:
Cryo-EM structure of PSII PsbA3-S264V from Thermosynechococcus vestitus BP-1 (local refinement)
Method: single particle / : Fan SB, Nakajima Y, Shen JR

PDB-9w5b:
cryo-EM structure of PSII D1-S264V from Thermosynechococcus vestitus BP-1
Method: single particle / : Fan SB, Jiang HW, Kato K, Tsai PC, Jia AQ, Nakajima Y, Sugiura M, Shen JR

PDB-9w7d:
cryo-EM structure of PSII PsbA3-S264V in complex with DCMU from Thermosynechococcus vestitus BP-1
Method: single particle / : Fan SB, Jiang HW, Kato K, Tsai PC, Jia AQ, Nakajima Y, Sugiura M, Shen JR

PDB-9wfz:
Cryo-EM structure of PSII PsbA3-S264V from Thermosynechococcus vestitus BP-1 (local refinement)
Method: single particle / : Fan SB, Nakajima Y, Shen JR

EMDB-63802:
Structure of the intial complex in filament assembly at 3.31 angstroms resolution, conformation 1.
Method: single particle / : Chen LX, Jiang WX, Cheng XQ, Dong X, Xing Q

PDB-9mcg:
Structure of the intial complex in filament assembly at 3.31 angstroms resolution, conformation 1.
Method: single particle / : Chen LX, Jiang WX, Cheng XQ, Dong X, Xing Q

EMDB-73799:
Cryo-EM structure of the human PRMT5:MEP50:pICln complex at a 4:4:4 stoichiometric ratio
Method: single particle / : Xu X, Chi Z, Jiang W, Li C

EMDB-73801:
Cryo-EM structure of the human PRMT5:MEP50:pICln complex at a 4:3:4 stoichiometric ratio
Method: single particle / : Xu X, Chi Z, Jiang W, Li C

PDB-9z49:
Cryo-EM structure of the human PRMT5:MEP50:pICln complex at a 4:4:4 stoichiometric ratio
Method: single particle / : Xu X, Chi Z, Jiang W, Li C

PDB-9z4a:
Cryo-EM structure of the human PRMT5:MEP50:pICln complex at a 4:3:4 stoichiometric ratio
Method: single particle / : Xu X, Chi Z, Jiang W, Li C

EMDB-76175:
Staphylococcus aureus MurJ in the outward-facing conformation
Method: single particle / : Li YE, Clemons WM

EMDB-76176:
Escherichia coli MurJ in the outward-facing conformation
Method: single particle / : Li YE, Clemons WM

EMDB-76177:
Staphylococcus aureus MurJ in the inward-facing conformation
Method: single particle / : Li YE, Clemons WM

EMDB-76178:
Staphylococcus aureus MurJ R176A mutant
Method: single particle / : Li YE, Clemons WM

PDB-11xx:
Staphylococcus aureus MurJ in the outward-facing conformation
Method: single particle / : Li YE, Clemons WM

PDB-11xy:
Escherichia coli MurJ in the outward-facing conformation
Method: single particle / : Li YE, Clemons WM

PDB-11xz:
Staphylococcus aureus MurJ in the inward-facing conformation
Method: single particle / : Li YE, Clemons WM

PDB-11ya:
Staphylococcus aureus MurJ R176A mutant
Method: single particle / : Li YE, Clemons WM

EMDB-81988:
Yeast-expressed polio type 3 stabilized virus-like particles
Method: single particle / : Hong Q, Cong Y

EMDB-81997:
Yeast-expressed polio type 3 expanded virus-like particles
Method: single particle / : Hong Q, Cong Y

PDB-43mi:
Yeast-expressed polio type 3 stabilized virus-like particles
Method: single particle / : Hong Q, Cong Y

PDB-43mu:
Yeast-expressed polio type 3 expanded virus-like particles
Method: single particle / : Hong Q, Cong Y

EMDB-66628:
Structure of the HCoV-229E spike glycoprotein determined by subtomogram averaging
Method: subtomogram averaging / : Liang J, Peng C, Li S

EMDB-66645:
Structure of the vesicular stomatitis virus nucleocapsid subbox
Method: subtomogram averaging / : Liu K, Zhang J, Li S

PDB-9x6s:
Structure of Influenza Hemagglutinin (A/Puerto Rico/8/1934)
Method: subtomogram averaging / : Chen Y, Li S

PDB-9x6z:
Structure of the HCoV-229E spike glycoprotein determined by subtomogram averaging
Method: subtomogram averaging / : Liang J, Peng C, Li S

EMDB-66146:
5-HT2AR bound to LSD in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

EMDB-66152:
5-HT2AR bound to IHCH-1904 in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

EMDB-66159:
5-HT2AR bound to IHCH-6122 in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

EMDB-66160:
5-HT2AR bound to IHCH-1906 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

EMDB-66164:
5-HT2B receptor bound to IHCH-1906 in complex with an antibody obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Yu J, Liu Z, Wang S, Cheng J

EMDB-66165:
5-HT2B receptor bound to IHCH-6122 in complex with an antibody obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Yu J, Liu Z, Wang S, Cheng J

PDB-9wpq:
5-HT2AR bound to LSD in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

PDB-9wpx:
5-HT2AR bound to IHCH-1904 in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

PDB-9wq5:
5-HT2AR bound to IHCH-6122 in complex with mini-Gq and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

PDB-9wq6:
5-HT2AR bound to IHCH-1906 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Chen Y, Yu J, Liu Z, Wang S, Cheng J

PDB-9wqa:
5-HT2B receptor bound to IHCH-1906 in complex with an antibody obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Yu J, Liu Z, Wang S, Cheng J

PDB-9wqb:
5-HT2B receptor bound to IHCH-6122 in complex with an antibody obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Li H, Tang L, Zhang J, Meng B, Cao D, Yu J, Liu Z, Wang S, Cheng J

EMDB-66200:
Tetramer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

PDB-9wsn:
Tetramer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Method: single particle / : Chengdong H, Simin W, Xuan C

EMDB-68735:
local reifnement of 5HT2AR-miniGq heterotrimer in complex with a psychedelic psilocin
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

EMDB-68737:
local refinement of 5HT2AR-miniGq heterotrimer in complex with a selective agonist IHCH-2330
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

EMDB-68739:
local refinement of 5HT2BR-fab heterotrimer in complex with a novel antagonist IHCH-2330
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

PDB-22wp:
local reifnement of 5HT2AR-miniGq heterotrimer in complex with a psychedelic psilocin
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

PDB-22wr:
local refinement of 5HT2AR-miniGq heterotrimer in complex with a selective agonist IHCH-2330
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

PDB-22wt:
local refinement of 5HT2BR-fab heterotrimer in complex with a novel antagonist IHCH-2330
Method: single particle / : Tang L, Ji X, Cheng J, Wang S

EMDB-82561:
Hexameric complex of serine proteinase(SDH) with hypothetical protein(HP)
Method: single particle / : Yu Y, Cheng J

EMDB-82563:
Heptameric complex of serine proteinase(SDH) with hypothetical protein(HP)
Method: single particle / : Yu Y, Cheng J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more