[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 567 items for (author: becker & a)

EMDB-19045:
DNA bound type IV-A3 CRISPR effector complex from K. pneumoniae

EMDB-19046:
DNA bound type IV-A1 CRISPR effector complex from P. oleovorans

EMDB-19120:
DNA bound type IV-A1 CRISPR effector complex from P. oleovorans, main body

EMDB-19124:
DNA bound type IV-A1 CRISPR effector complex from P. oleovorans Cas6 focused map

EMDB-19125:
DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

EMDB-19126:
Main density of the DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

EMDB-19127:
DinG focused map of DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

EMDB-19688:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state I)

EMDB-19689:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state II)

EMDB-19690:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state III)

EMDB-51026:
Focused map of Cas6 of the CRISPR type IV-A1 DinG bound complex

PDB-8rc2:
DNA bound type IV-A3 CRISPR effector complex from K. pneumoniae

PDB-8rc3:
DNA bound type IV-A1 CRISPR effector complex from P. oleovorans

PDB-8rfj:
DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

PDB-8s35:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state I)

PDB-8s36:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state II)

PDB-8s37:
DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state III)

EMDB-17972:
Cryo-EM structure of DHS-ERK2 complex with 1:1 stoichiometry refined in C1 symmetry

EMDB-17977:
Cryo-EM structure of the third of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C1 symmetry

EMDB-17978:
Cryo-EM structure of the third of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C2 symmetry

EMDB-17981:
Cryo-EM structure of the second of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C1 symmetry

EMDB-17982:
Cryo-EM structure of the second of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C2 symmetry

EMDB-17983:
Cryo-EM structure of the first of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C1 symmetry

EMDB-17984:
Cryo-EM structure of the first of three possible DHS-ERK2 complexes with 1:2 stoichiometry refined in C2 symmetry

EMDB-17985:
Cryo-EM structure of DHS-ERK2 complex with 1:3 stoichiometry refined in C1 symmetry

EMDB-17986:
Cryo-EM structure of DHS-ERK2 complex with 1:4 stoichiometry refined in C1 symmetry

EMDB-17987:
Cryo-EM structure of DHS-ERK2 complex with 1:4 stoichiometry refined in D2 symmetry

PDB-8pvu:
Cryo-EM structure of DHS-ERK2 complex with 1:1 stoichiometry refined in C1 symmetry

EMDB-41310:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB

PDB-8tjs:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB

EMDB-18950:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.

EMDB-19004:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.

PDB-8r6c:
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.

PDB-8r8m:
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.

EMDB-50296:
70S Escherichia coli ribosome with P-site initiatior tRNA.

PDB-9fbv:
70S Escherichia coli ribosome with P-site initiatior tRNA.

EMDB-19638:
YlmH bound to PtRNA-50S

EMDB-19641:
YlmH bound to stalled 50S subunits with RqcH and PtRNA

PDB-8s1p:
YlmH bound to PtRNA-50S

PDB-8s1u:
YlmH bound to stalled 50S subunits with RqcH and PtRNA

EMDB-41422:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1

PDB-8tnl:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1

EMDB-41441:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2

PDB-8toa:
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2

EMDB-18320:
E. coli ApdP-stalled ribosomal complex

EMDB-18332:
B. subtilis ApdA-stalled ribosomal complex

EMDB-18340:
ApdP-SRC with P-tRNA only

EMDB-18341:
ApdA-SRC with P-tRNA only

PDB-8qbt:
E. coli ApdP-stalled ribosomal complex

PDB-8qcq:
B. subtilis ApdA-stalled ribosomal complex

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more