[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,235 items for (author: alexander & r)

EMDB-70909:
Heteromeric GluA1/A2 in the inactive state, consensus refinement of LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70910:
Heteromeric GluA1/A2 in the inactive state, transmembrane domain (TMD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70911:
Heteromeric GluA1/A2 in the inactive state, ligand binding domain (LBD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70912:
Heteromeric GluA1/A2 in the inactive state, composite map of LBD-TMD
Method: single particle / : Yen LY, Sobolevsky AI, Newton TP, Gangwar SP

EMDB-70913:
Heteromeric GluA1/A2 in the activated state, consensus refinement of ATD-LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70914:
Heteromeric GluA1/A2 in the activated state, ligand binding domain (LBD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70915:
Heteromeric GluA1/A2 in the activated state, transmembrane domain (TMD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70916:
Heteromeric GluA1/A2-CNIH1 in the activated state, consensus refinement of LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70917:
Heteromeric GluA1/A2-CNIH1 in the activated state, ligand binding domain (LBD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70918:
Heteromeric GluA1/A2-CNIH1 in the activated state, transmembrane domain (TMD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70919:
Composite map of GluA1/A2 in the activated state, in complex with positive allosteric modulator (R,R)-2b and agonist glutamate (ATD-LBD-TMD)
Method: single particle / : Yen LY, Sobolevsky AI, Newton TP, Gangwar SP

EMDB-70920:
Heteromeric GluA1/A2-CNIH1 in the activated state, composite map of LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70921:
Heteromeric GluA1/A2 in the desensitized state, consensus refinement of ATD-LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70922:
Heteromeric GluA1/A2 in the desensitized state, amino-terminal domain (ATD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70923:
Heteromeric GluA1/A2 in the desensitized state, ligand binding domain (LBD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70924:
Heteromeric GluA1/A2 in the desensitized state, transmembrane domain (TMD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-70925:
Heteromeric GluA1/A2 in the desensitized state, composite map of ATD-LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-75274:
Heteromeric GluA1/A2 in the activated state, amino-terminal domain (ATD)
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

PDB-9ovt:
Heteromeric GluA1/A2 in the inactive state, composite map of LBD-TMD
Method: single particle / : Yen LY, Sobolevsky AI, Newton TP, Gangwar SP

PDB-9ovu:
Composite map of GluA1/A2 in the activated state, in complex with positive allosteric modulator (R,R)-2b and agonist glutamate (ATD-LBD-TMD)
Method: single particle / : Yen LY, Sobolevsky AI, Newton TP, Gangwar SP

PDB-9ovv:
Heteromeric GluA1/A2-CNIH1 in the activated state, composite map of LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

PDB-9ovw:
Heteromeric GluA1/A2 in the desensitized state, composite map of ATD-LBD-TMD
Method: single particle / : Yen LY, Newton TP, Gangwar SP, Sobolevsky AI

EMDB-74561:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74562:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74563:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74564:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75074:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1, Consensus map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75075:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1, Focused
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75079:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2, Consensus map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75080:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2, Focused map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zq9:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqa:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqb:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqc:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-54629:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54630:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54631:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54632:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6r:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6s:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6t:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6u:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-53876:
Influenza A/H7N9 polymerase in complex with a 70-mer template in stalled elongation with backtracking and stem.
Method: single particle / : Arragain B, Cusack S

EMDB-53877:
Influenza A/H7N9 polymerase in complex with a 70-mer RNA template, in stalled elongation.
Method: single particle / : Arragain B, Cusack S

PDB-9raf:
Influenza A/H7N9 polymerase in complex with a 70-mer template in stalled elongation with backtracking and stem.
Method: single particle / : Arragain B, Cusack S

PDB-9rag:
Influenza A/H7N9 polymerase in complex with a 70-mer RNA template, in stalled elongation.
Method: single particle / : Arragain B, Cusack S

EMDB-53260:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

PDB-9qo9:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

EMDB-73489:
Computationally Designed Tetramer of Apo-HC4 (C1 symmetry)
Method: single particle / : Eng VH, Narehood SM, Tezcan FA

PDB-9ytq:
Computationally Designed Tetramer of Apo-HC4 (C1 symmetry)
Method: single particle / : Eng VH, Narehood SM, Tezcan FA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more