[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 977 items for (author: ai & hs)

EMDB-18661:
Structure of the Bacteriophage PhiKZ non-virion RNA Polymerase bound to DNA and RNA
Method: single particle / : de Martin Garrido N, Yakunina M, Aylett CHS

EMDB-41107:
CryoEM structure of TR-TRAP
Method: single particle / : Zhao H, Asturias F

PDB-8t9d:
CryoEM structure of TR-TRAP
Method: single particle / : Zhao H, Asturias F

EMDB-60096:
Human GPR103 -Gq complex bound to QRFP26
Method: single particle / : Iwama A, Akasaka H, Sano FK, Oshima HS, Shihoya W, Nureki O

EMDB-37827:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37828:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37829:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37830:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt6:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt7:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt8:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt9:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-60254:
Vesamicol-bound VAChT
Method: single particle / : Zhang Z, Zhang Y, Dai F, Zhang YX, Lee CH

EMDB-60255:
Acetylcholine-bound VAChT
Method: single particle / : Zhang Z, Zhang Y, Dai F, Zhang YX, Lee CH

PDB-8zmr:
Vesamicol-bound VAChT
Method: single particle / : Zhang Z, Zhang Y, Dai F, Zhang YX, Lee CH

PDB-8zms:
Acetylcholine-bound VAChT
Method: single particle / : Zhang Z, Zhang Y, Dai F, Zhang YX, Lee CH

EMDB-38216:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

PDB-8xbf:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-19599:
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Method: subtomogram averaging / : Roske Y, Mikirtumov V, Daumke O, Kudryashev M, Dick A

PDB-8ryt:
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Method: subtomogram averaging / : Roske Y, Mikirtumov V, Daumke O, Kudryashev M, Dick A

EMDB-40968:
Atomic model of the mammalian Mediator complex with MED26 subunit
Method: single particle / : Zhao H, Asturias F

EMDB-40972:
CryoEM map of TR-TRAP
Method: single particle / : Zhao H, Asturias F

EMDB-40975:
CryoEM map of mouse mediator complex with alternate conformation CKM module
Method: single particle / : Zhao H, Asturias F

PDB-8t1i:
Atomic model of the mammalian Mediator complex with MED26 subunit
Method: single particle / : Zhao H, Asturias F

EMDB-39546:
SARS-CoV-2 Delta Spike in complex with JL-8C
Method: single particle / : Nguyen VHT, Chen X

EMDB-39547:
SARS-CoV-2 Delta Spike in complex with JM-1A
Method: single particle / : Nguyen VHT, Chen X

EMDB-39685:
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C
Method: single particle / : Chen X, Wu YM

EMDB-39686:
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B
Method: single particle / : Chen X, Wu YM

PDB-8yro:
SARS-CoV-2 Delta Spike in complex with JL-8C
Method: single particle / : Nguyen VHT, Chen X

PDB-8yrp:
SARS-CoV-2 Delta Spike in complex with JM-1A
Method: single particle / : Nguyen VHT, Chen X

PDB-8yz5:
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C
Method: single particle / : Chen X, Wu YM

PDB-8yz6:
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B
Method: single particle / : Chen X, Wu YM

EMDB-40815:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, N611 and base from participant 017
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40816:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 03
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40817:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 07
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40818:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp120-GH and base from participant 09
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40819:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, gp41-GH/FP and base from participant 11
Method: single particle / : Karlinsey D, Ozorowski G, Ward AB

EMDB-40248:
CRISPR-Cas type III-D effector complex
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40250:
CRISPR-Cas type III-D effector complex bound to a self-target RNA in the pre-cleavage state
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40251:
CRISPR-Cas type III-D effector complex bound to self-target RNA in a post-cleavage state
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40276:
CRISPR-Cas type III-D effector complex consensus map
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40296:
CRISPR-Cas type III-D effector complex local refinement map
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40297:
CRISPR-Cas type III-D effector complex bound to a target RNA local refinement map
Method: single particle / : Schwartz EA, Taylor DW

EMDB-40298:
CRISPR-Cas type III-D effector complex bound to a target RNA consensus map
Method: single particle / : Schwartz EA, Taylor DW

PDB-8s9t:
CRISPR-Cas type III-D effector complex
Method: single particle / : Schwartz EA, Taylor DW

PDB-8s9v:
CRISPR-Cas type III-D effector complex bound to a self-target RNA in the pre-cleavage state
Method: single particle / : Schwartz EA, Taylor DW

PDB-8s9x:
CRISPR-Cas type III-D effector complex bound to self-target RNA in a post-cleavage state
Method: single particle / : Schwartz EA, Taylor DW

EMDB-18334:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18335:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18336:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more