[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 39 items for (author: pinto & jr)

EMDB-42681:
The structure of the native cardiac thin filament troponin core in Ca2+-free state from the upper strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42682:
The structure of the native cardiac thin filament troponin core in Ca2+-free tilted state from the upper strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42683:
The structure of the native cardiac thin filament troponin core in Ca2+-free rotated state from the upper strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42800:
The structure of the native cardiac thin filament troponin core in Ca2+-free state from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42833:
The structure of the native cardiac thin filament troponin core in Ca2+-free rotated state from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42835:
The structure of the native cardiac thin filament troponin core in Ca2+-free tilted state from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42846:
The structure of the native cardiac thin filament troponin core in Ca2+-bound fully activated state from the upper strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42847:
The structure of the native cardiac thin filament troponin core in Ca2+-bound partially activated state from the upper strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42849:
The structure of the native cardiac thin filament troponin core in Ca2+-bound fully activated state 1 from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42856:
The structure of the native cardiac thin filament troponin core in Ca2+-bound fully activated state 2 from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42858:
The structure of the native cardiac thin filament troponin core in Ca2+-bound partially activated state from the lower strand
Method: single particle / : Galkin VE, Risi CM

EMDB-42874:
The structure of the native cardiac thin filament troponin core in Ca2+-free state from the upper strand activated by the C1-domain of cardiac myosin binding protein C
Method: single particle / : Galkin VE, Risi CM

EMDB-40468:
In situ human cardiac thick filament in the relaxed state
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40471:
Human cardiac interacting heads motif (IHM-C) in complete form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40475:
Human cardiac interacting heads motif (IHM-C) in semi form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40476:
Human cardiac interacting heads motif (IHM-S)
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40478:
Human cardiac interacting heads motif (IHM-D) in semi form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-27331:
The structure of the native cardiac thin filament junction region
Method: single particle / : Galkin VE, Risi CM

EMDB-14359:
Tomogram showing SARS-CoV-2 virions that have a budding like profile within a viral containing compartment
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14361:
Tomogram showing SARS-CoV-2 virions that have a budding like profile within a viral containing compartment
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14363:
Tomogram showing SARS-CoV-2 virions that have a budding like profile within a viral containing compartment
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14364:
Tomogram showing SARS-CoV-2 S glycoprotein on the membrane of a viral containing compartment
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14365:
Tomogram showing SARS-CoV-2 S glycoprotein on the membrane of a viral containing compartment
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14366:
Tomogram of a SARS-CoV-2 virion fused to the plasma membrane of a ciliated airway cell
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-14367:
Tomogram showing SARS-CoV-2 virions within a viral containing compartment of an infected airway cell
Method: electron tomography / : Pinto AL, Rai RK, Brown JC, Griffin P, Edgar JR, Shah A, Singanayagam A, Hogg C, Barclay WS, Futter CE, Burgoyne T

EMDB-24347:
SARS-CoV-2 S glycoprotein in complex with S2X259 Fab
Method: single particle / : Veesler D, Tortorici MA, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-24365:
SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains)
Method: single particle / : Veesler D, Tortorici MA, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-24299:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-24300:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Veesler D

EMDB-24301:
SARS-CoV-2 spike glycoprotein ectodomain in complex with the S2H97 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Veesler D

EMDB-22964:
Structure of cardiac native thin filament at pCa=5.8 having upper and lower troponins in Ca2+ free state
Method: single particle / : Galkin VE, Risi CM

EMDB-22965:
Structure of cardiac native thin filament at pCa=5.8 having upper and lower troponins in Ca2+ bound state
Method: single particle / : Galkin VE, Risi CM

EMDB-22966:
Structure of the native cardiac thin filament at pCa=5.8 having upper Tn in Ca2+ free state and lower Tn in Ca2+ bound state
Method: single particle / : Galkin VE, Risi CM

EMDB-22978:
Structure of upper Tn Ca2+ free (rotated) and lower Tn Ca2+ bound cardiac native thin filament at pCa=5.8
Method: single particle / : Galkin VE, Risi CM

EMDB-22981:
Structure of cardiac native thin filament at pCa=5.8 having upper troponin in Ca2+ bound state and lower troponin in Ca2+ free state
Method: single particle / : Galkin VE, Risi CM

EMDB-1950:
3D-Structure of tarantula myosin filament obtained by cryo-electron microscopy
Method: helical / : Alamo L, Wriggers W, Pinto A, Bartoli F, Salazar L, Zhao F, Craig R, Padron R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more