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U48

Summary
Name:5-METHYL-2'-DEOXY-N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE
Synonyms:[(2~{R},3~{S},5~{R})-5-(4-azanyl-5-methyl-2-oxidanylidene-pyrimidin-3-ium-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula:C10 H17 N3 O7 P
Formal charge:1
Formula weight:322.232 Da
Component type:DNA linking

Chemical Identifiers

ProgramVersionName
OpenEye OEToolkits2.0.7[(2~{R},3~{S},5~{R})-5-(4-azanyl-5-methyl-2-oxidanylidene-pyrimidin-3-ium-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

TypeProgramVersionDescriptor
InChIInChI1.03InChI=1S/C10H16N3O7P/c1-5-3-13(10(15)12-9(5)11)8-2-6(14)7(20-8)4-19-21(16,17)18/h3,6-8,14H,2,4H2,1H3,(H2,11,12,15)(H2,16,17,18)/p+1/t6-,7+,8+/m0/s1
InChIKeyInChI1.03RGDVNLHBCKWZDA-XLPZGREQSA-O
SMILES_CANONICALCACTVS3.385CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)[NH+]=C1N
SMILESCACTVS3.385CC1=CN([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)[NH+]=C1N
SMILES_CANONICALOpenEye OEToolkits2.0.7CC1=CN(C(=O)[NH+]=C1N)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
SMILESOpenEye OEToolkits2.0.7CC1=CN(C(=O)[NH+]=C1N)C2CC(C(O2)COP(=O)(O)O)O

219869

PDB entries from 2024-05-15

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