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CGY

Summary
Name:(1R)-1,4-anhydro-2-deoxy-1-(2,6-diamino-5-nitropyridin-3-yl)-5-O-phosphono-D-erythro-pentitol
Formula:C10 H15 N4 O8 P
Formal charge:0
Formula weight:350.222 Da
Component type:DNA linking

Chemical Identifiers

ProgramVersionName
ACDLabs14.52(1R)-1,4-anhydro-2-deoxy-1-(2,6-diamino-5-nitropyridin-3-yl)-5-O-phosphono-D-erythro-pentitol
OpenEye OEToolkits3.1.0.0[(2~{R},3~{S},5~{R})-5-[2,6-bis(azanyl)-5-nitro-pyridin-3-yl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs14.52OP(=O)(O)OCC1OC(CC1O)c1cc([N+]([O-])=O)c(N)nc1N
InChIInChI1.06InChI=1S/C10H15N4O8P/c11-9-4(1-5(14(16)17)10(12)13-9)7-2-6(15)8(22-7)3-21-23(18,19)20/h1,6-8,15H,2-3H2,(H4,11,12,13)(H2,18,19,20)/t6-,7+,8+/m0/s1
InChIKeyInChI1.06XDFYIZOVZDNRDI-XLPZGREQSA-N
SMILES_CANONICALCACTVS3.385Nc1nc(N)c(cc1[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)[N+]([O-])=O
SMILESCACTVS3.385Nc1nc(N)c(cc1[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)[N+]([O-])=O
SMILES_CANONICALOpenEye OEToolkits3.1.0.0c1c(c(nc(c1[N+](=O)[O-])N)N)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
SMILESOpenEye OEToolkits3.1.0.0c1c(c(nc(c1[N+](=O)[O-])N)N)C2CC(C(O2)COP(=O)(O)O)O

256158

PDB entries from 2026-07-08

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