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6FC

Summary
Name:2'-trifluoromethylthio-2'-deoxycytidine
Formula:C10 H15 F3 N3 O7 P S
Formal charge:0
Formula weight:409.276 Da
Component type:RNA LINKING

Chemical Identifiers

ProgramVersionName
ACDLabs12.012'-thio-2'-S-(trifluoromethyl)-5'-O-(trihydroxy-lambda~5~-phosphanyl)cytidine
OpenEye OEToolkits1.7.64-azanyl-1-[(2R,3R,4R,5R)-4-oxidanyl-3-(trifluoromethylsulfanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]pyrimidin-2-one

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01FC(F)(F)SC2C(O)C(OC2N1C(=O)N=C(N)C=C1)COP(O)(O)O
InChIInChI1.03InChI=1S/C10H15F3N3O7PS/c11-10(12,13)25-7-6(17)4(3-22-24(19,20)21)23-8(7)16-2-1-5(14)15-9(16)18/h1-2,4,6-8,17,19-21,24H,3H2,(H2,14,15,18)/t4-,6-,7-,8-/m1/s1
InChIKeyInChI1.03RXIZMKBDEBXDBO-XVFCMESISA-N
SMILES_CANONICALCACTVS3.385NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[PH](O)(O)O)[C@@H](O)[C@H]2SC(F)(F)F
SMILESCACTVS3.385NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[PH](O)(O)O)[CH](O)[CH]2SC(F)(F)F
SMILES_CANONICALOpenEye OEToolkits1.7.6C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(O)(O)O)O)SC(F)(F)F
SMILESOpenEye OEToolkits1.7.6C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(O)(O)O)O)SC(F)(F)F

221716

PDB entries from 2024-06-26

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