6FC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | sing | 1.72Å | 1.50Å | |
| P | O5' | sing | 1.72Å | 1.60Å | |
| P | OP2 | sing | 1.72Å | 1.50Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.49Å | |
| C4' | C3' | sing | 1.54Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.48Å | |
| C7' | F1' | sing | 1.40Å | 1.32Å | |
| C7' | F2' | sing | 1.40Å | 1.33Å | |
| C7' | F3' | sing | 1.40Å | 1.33Å | |
| C7' | S2' | sing | 1.81Å | 1.77Å | |
| C2' | S2' | sing | 1.81Å | 1.84Å | |
| C2' | C1' | sing | 1.55Å | 1.49Å | |
| C1' | O4' | sing | 1.44Å | 1.45Å | |
| C1' | N1 | sing | 1.47Å | 1.45Å | |
| N1 | C6 | sing | 1.36Å | 1.35Å | |
| N1 | C2 | sing | 1.35Å | 1.34Å | |
| C6 | C5 | doub | 1.36Å | 1.39Å | |
| C5 | C4 | sing | 1.41Å | 1.39Å | |
| C4 | N4 | sing | 1.38Å | 1.39Å | |
| C4 | N3 | doub | 1.33Å | 1.34Å | |
| N3 | C2 | sing | 1.33Å | 1.32Å | |
| C2 | O2 | doub | 1.22Å | 1.22Å | |
| OP1 | H1 | sing | 0.97Å | 0.95Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | H4'1 | sing | 1.09Å | 1.10Å | |
| C3' | H3'1 | sing | 1.09Å | 1.10Å | |
| O3' | H2 | sing | 0.97Å | 0.95Å | |
| C2' | H2'1 | sing | 1.09Å | 1.10Å | |
| C1' | H1'1 | sing | 1.09Å | 1.10Å | |
| C6 | H61 | sing | 1.08Å | 1.08Å | |
| C5 | H51 | sing | 1.08Å | 1.08Å | |
| N4 | H41 | sing | 0.97Å | 1.00Å | |
| N4 | H42 | sing | 0.97Å | 1.00Å | |
| OP2 | H3 | sing | 0.97Å | 0.95Å | |
| P | OP3 | sing | 1.72Å | 18.43Å | |
| P | H4 | sing | 1.47Å | 18.43Å | |
| OP3 | H5 | sing | 0.97Å | 0.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | O5' | 111.8° | 90.0° |
| OP1 | P | OP2 | 117.3° | 120.0° |
| P | OP1 | H1 | 109.5° | 114.0° |
| OP1 | P | OP3 | 78.3° | 90.0° |
| OP1 | P | H4 | 78.3° | 120.0° |
| O5' | P | OP2 | 105.9° | 90.0° |
| P | O5' | C5' | 122.7° | 114.0° |
| O5' | P | OP3 | 162.0° | 180.0° |
| O5' | P | H4 | 162.0° | 90.0° |
| P | OP2 | H3 | 109.5° | 114.0° |
| OP2 | P | OP3 | 80.6° | 90.0° |
| OP2 | P | H4 | 80.6° | 120.0° |
| O5' | C5' | C4' | 111.4° | 109.4° |
| O5' | C5' | H5'1 | 109.0° | 109.5° |
| O5' | C5' | H5'2 | 109.0° | 109.5° |
| C5' | C4' | C3' | 116.9° | 110.4° |
| C5' | C4' | O4' | 109.2° | 110.4° |
| C4' | C5' | H5'1 | 109.0° | 109.5° |
| C4' | C5' | H5'2 | 109.0° | 109.5° |
| C5' | C4' | H4'1 | 108.6° | 110.4° |
| C3' | C4' | O4' | 104.5° | 104.8° |
| C4' | C3' | O3' | 110.7° | 110.5° |
| C4' | C3' | C2' | 101.3° | 104.1° |
| C3' | C4' | H4'1 | 108.2° | 110.4° |
| C4' | C3' | H3'1 | 109.5° | 110.5° |
| C4' | O4' | C1' | 107.8° | 105.3° |
| O4' | C4' | H4'1 | 109.2° | 110.4° |
| O3' | C3' | C2' | 114.0° | 110.5° |
| O3' | C3' | H3'1 | 110.8° | 110.5° |
| C3' | O3' | H2 | 109.5° | 114.0° |
| C3' | C2' | S2' | 109.6° | 110.5° |
| C3' | C2' | C1' | 102.1° | 104.0° |
| C2' | C3' | H3'1 | 110.1° | 110.6° |
| C3' | C2' | H2'1 | 112.2° | 110.5° |
| F1' | C7' | F2' | 109.1° | 109.5° |
| F1' | C7' | F3' | 106.5° | 109.4° |
| F1' | C7' | S2' | 108.5° | 109.5° |
| F2' | C7' | F3' | 108.2° | 109.4° |
| F2' | C7' | S2' | 111.1° | 109.5° |
| F3' | C7' | S2' | 113.3° | 109.5° |
| C7' | S2' | C2' | 104.3° | 103.0° |
| S2' | C2' | C1' | 113.5° | 110.5° |
| S2' | C2' | H2'1 | 107.6° | 110.4° |
| C2' | C1' | O4' | 105.8° | 104.8° |
| C2' | C1' | N1 | 114.2° | 110.4° |
| C1' | C2' | H2'1 | 111.9° | 110.7° |
| C2' | C1' | H1'1 | 108.7° | 110.4° |
| O4' | C1' | N1 | 109.7° | 110.4° |
| O4' | C1' | H1'1 | 109.2° | 110.4° |
| C1' | N1 | C6 | 121.0° | 119.8° |
| C1' | N1 | C2 | 118.9° | 119.8° |
| N1 | C1' | H1'1 | 109.2° | 110.4° |
| C6 | N1 | C2 | 120.1° | 120.4° |
| N1 | C6 | C5 | 120.3° | 119.3° |
| N1 | C6 | H61 | 119.9° | 120.4° |
| N1 | C2 | N3 | 122.3° | 121.0° |
| N1 | C2 | O2 | 118.2° | 119.5° |
| C6 | C5 | C4 | 116.0° | 119.0° |
| C5 | C6 | H61 | 119.8° | 120.3° |
| C6 | C5 | H51 | 122.0° | 120.5° |
| C5 | C4 | N4 | 117.7° | 120.2° |
| C5 | C4 | N3 | 122.4° | 119.6° |
| C4 | C5 | H51 | 122.0° | 120.6° |
| N4 | C4 | N3 | 119.9° | 120.1° |
| C4 | N4 | H41 | 120.0° | 120.0° |
| C4 | N4 | H42 | 120.0° | 120.1° |
| C4 | N3 | C2 | 119.0° | 120.7° |
| N3 | C2 | O2 | 119.5° | 119.5° |
| H5'1 | C5' | H5'2 | 109.4° | 109.5° |
| H41 | N4 | H42 | 120.0° | 120.0° |
| OP3 | P | H4 | 0.0° | 90.0° |
| P | OP3 | H5 | 90.0° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | O5' | OP2 | 128.9° | 120.0° |
| OP1 | P | O5' | OP3 | 121.8° | 129.9° |
| OP1 | P | O5' | H4 | 121.8° | 120.0° |
| OP1 | P | OP2 | OP3 | 71.6° | 90.0° |
| OP1 | P | OP2 | H4 | 71.6° | 180.0° |
| OP1 | P | O5' | C5' | 49.7° | 164.7° |
| OP1 | P | OP2 | H3 | 180.0° | 28.5° |
| OP1 | P | OP3 | H4 | 90.0° | 120.0° |
| OP1 | P | OP3 | H5 | 90.0° | 60.0° |
| O5' | P | OP2 | OP3 | 162.8° | 180.0° |
| O5' | P | OP2 | H4 | 162.8° | 90.0° |
| P | O5' | C5' | C4' | 167.1° | 174.9° |
| O5' | P | OP1 | H1 | 180.0° | 180.0° |
| P | O5' | C5' | H5'1 | 72.6° | 65.1° |
| P | O5' | C5' | H5'2 | 46.8° | 55.0° |
| O5' | P | OP2 | H3 | 54.4° | 61.5° |
| O5' | P | OP3 | H4 | 90.0° | 9.9° |
| O5' | P | OP3 | H5 | 90.0° | 69.9° |
| OP2 | P | O5' | C5' | 178.6° | 75.3° |
| OP2 | P | OP1 | H1 | 57.3° | 90.1° |
| OP2 | P | OP3 | H4 | 90.0° | 120.0° |
| OP2 | P | OP3 | H5 | 90.0° | 180.0° |
| O5' | C5' | C4' | H5'1 | 120.3° | 120.0° |
| O5' | C5' | C4' | H5'2 | 120.3° | 120.0° |
| O5' | C5' | C4' | C3' | 56.9° | 175.0° |
| O5' | C5' | C4' | O4' | 61.5° | 69.6° |
| O5' | C5' | H5'1 | H5'2 | 119.1° | 120.0° |
| O5' | C5' | C4' | H4'1 | 179.6° | 52.7° |
| C5' | O5' | P | OP3 | 72.2° | 34.8° |
| C5' | O5' | P | H4 | 72.2° | 44.7° |
| C5' | C4' | C3' | O4' | 120.9° | 118.9° |
| C5' | C4' | C3' | H4'1 | 122.9° | 122.3° |
| C5' | C4' | O4' | H4'1 | 118.6° | 122.3° |
| C5' | C4' | C3' | O3' | 80.7° | 98.5° |
| C5' | C4' | C3' | C2' | 158.0° | 142.8° |
| C5' | C4' | O4' | C1' | 142.8° | 159.3° |
| C4' | C5' | H5'1 | H5'2 | 119.1° | 120.0° |
| C5' | C4' | C3' | H3'1 | 41.7° | 24.0° |
| C3' | C4' | O4' | H4'1 | 115.6° | 118.8° |
| C4' | C3' | O3' | C2' | 113.5° | 114.7° |
| C4' | C3' | O3' | H3'1 | 121.7° | 122.6° |
| C4' | C3' | C2' | H3'1 | 115.9° | 118.7° |
| C4' | C3' | C2' | S2' | 78.4° | 118.7° |
| C4' | C3' | C2' | C1' | 42.2° | 0.0° |
| C3' | C4' | O4' | C1' | 17.0° | 40.5° |
| C3' | C4' | C5' | H5'1 | 63.4° | 65.0° |
| C3' | C4' | C5' | H5'2 | 177.2° | 55.0° |
| C4' | C3' | O3' | H2 | 180.0° | 61.4° |
| C4' | C3' | C2' | H2'1 | 162.1° | 118.8° |
| O4' | C4' | C3' | O3' | 158.4° | 142.6° |
| O4' | C4' | C3' | C2' | 37.1° | 23.9° |
| C4' | O4' | C1' | C2' | 9.6° | 40.5° |
| C4' | O4' | C1' | N1 | 114.0° | 159.3° |
| O4' | C4' | C5' | H5'1 | 178.2° | 50.4° |
| O4' | C4' | C5' | H5'2 | 58.8° | 170.4° |
| O4' | C4' | C3' | H3'1 | 79.1° | 94.8° |
| C4' | O4' | C1' | H1'1 | 126.4° | 78.3° |
| O3' | C3' | C2' | H3'1 | 125.2° | 122.6° |
| O3' | C3' | C2' | S2' | 40.6° | 0.0° |
| O3' | C3' | C2' | C1' | 161.2° | 118.7° |
| O3' | C3' | C4' | H4'1 | 42.2° | 23.7° |
| O3' | C3' | C2' | H2'1 | 78.9° | 122.5° |
| C3' | C2' | S2' | C7' | 171.4° | 66.5° |
| C3' | C2' | S2' | C1' | 113.4° | 114.6° |
| C3' | C2' | S2' | H2'1 | 122.2° | 122.6° |
| C3' | C2' | C1' | H2'1 | 120.1° | 118.7° |
| C3' | C2' | C1' | O4' | 32.9° | 24.0° |
| C3' | C2' | C1' | N1 | 87.8° | 142.8° |
| C2' | C3' | C4' | H4'1 | 79.1° | 95.0° |
| C2' | C3' | O3' | H2 | 66.5° | 176.1° |
| C3' | C2' | C1' | H1'1 | 150.1° | 94.9° |
| F1' | C7' | F2' | F3' | 115.5° | 120.0° |
| F1' | C7' | F2' | S2' | 119.6° | 120.1° |
| F1' | C7' | F3' | S2' | 119.2° | 120.0° |
| F1' | C7' | S2' | C2' | 176.8° | 60.0° |
| F2' | C7' | F3' | S2' | 123.6° | 120.0° |
| F2' | C7' | S2' | C2' | 56.8° | 60.0° |
| F3' | C7' | S2' | C2' | 65.2° | 180.0° |
| C7' | S2' | C2' | C1' | 75.2° | 178.9° |
| C7' | S2' | C2' | H2'1 | 49.1° | 56.1° |
| S2' | C2' | C1' | H2'1 | 122.1° | 122.7° |
| S2' | C2' | C1' | O4' | 84.9° | 142.6° |
| S2' | C2' | C1' | N1 | 154.4° | 98.6° |
| S2' | C2' | C3' | H3'1 | 165.7° | 122.6° |
| S2' | C2' | C1' | H1'1 | 32.2° | 23.8° |
| C2' | C1' | O4' | N1 | 123.6° | 118.8° |
| C2' | C1' | O4' | H1'1 | 116.8° | 118.8° |
| C2' | C1' | N1 | H1'1 | 121.9° | 122.3° |
| C2' | C1' | N1 | C6 | 103.0° | 115.0° |
| C2' | C1' | N1 | C2 | 77.6° | 65.3° |
| C1' | C2' | C3' | H3'1 | 73.6° | 118.7° |
| O4' | C1' | N1 | H1'1 | 119.6° | 122.4° |
| O4' | C1' | N1 | C6 | 15.5° | 129.7° |
| O4' | C1' | N1 | C2 | 163.8° | 50.1° |
| C1' | O4' | C4' | H4'1 | 98.6° | 78.4° |
| O4' | C1' | C2' | H2'1 | 153.0° | 94.7° |
| C1' | N1 | C6 | C2 | 179.3° | 179.8° |
| C1' | N1 | C6 | C5 | 179.3° | 180.0° |
| C1' | N1 | C2 | N3 | 179.8° | 179.7° |
| C1' | N1 | C2 | O2 | 0.1° | 0.0° |
| N1 | C1' | C2' | H2'1 | 32.3° | 24.1° |
| C1' | N1 | C6 | H61 | 0.7° | 0.0° |
| N1 | C6 | C5 | H61 | 180.0° | 180.0° |
| N1 | C6 | C5 | C4 | 0.4° | 0.0° |
| C6 | N1 | C2 | N3 | 0.4° | 0.5° |
| C6 | N1 | C2 | O2 | 179.5° | 179.8° |
| C6 | N1 | C1' | H1'1 | 135.1° | 7.3° |
| N1 | C6 | C5 | H51 | 179.6° | 180.0° |
| C2 | N1 | C6 | C5 | 0.0° | 0.2° |
| N1 | C2 | N3 | C4 | 0.4° | 0.6° |
| N1 | C2 | N3 | O2 | 179.9° | 179.7° |
| C2 | N1 | C1' | H1'1 | 44.2° | 172.5° |
| C2 | N1 | C6 | H61 | 180.0° | 179.7° |
| C6 | C5 | C4 | H51 | 180.0° | 180.0° |
| C6 | C5 | C4 | N4 | 179.7° | 180.0° |
| C6 | C5 | C4 | N3 | 0.3° | 0.1° |
| C5 | C4 | N4 | N3 | 179.4° | 180.0° |
| C5 | C4 | N3 | C2 | 0.0° | 0.3° |
| C4 | C5 | C6 | H61 | 179.7° | 180.0° |
| C5 | C4 | N4 | H41 | 179.4° | 0.0° |
| C5 | C4 | N4 | H42 | 0.7° | 179.9° |
| N4 | C4 | N3 | C2 | 179.3° | 179.7° |
| N4 | C4 | C5 | H51 | 0.3° | 0.0° |
| C4 | N4 | H41 | H42 | 179.9° | 179.9° |
| C4 | N3 | C2 | O2 | 179.5° | 179.7° |
| N3 | C4 | C5 | H51 | 179.6° | 180.0° |
| N3 | C4 | N4 | H41 | 0.0° | 179.9° |
| N3 | C4 | N4 | H42 | 180.0° | 0.0° |
| H1 | OP1 | P | OP3 | 15.6° | 0.0° |
| H1 | OP1 | P | H4 | 15.6° | 90.0° |
| H5'1 | C5' | C4' | H4'1 | 59.3° | 172.7° |
| H5'2 | C5' | C4' | H4'1 | 60.1° | 67.2° |
| H4'1 | C4' | C3' | H3'1 | 164.6° | 146.3° |
| H3'1 | C3' | O3' | H2 | 58.3° | 61.2° |
| H3'1 | C3' | C2' | H2'1 | 46.2° | 0.1° |
| H2'1 | C2' | C1' | H1'1 | 89.8° | 146.4° |
| H61 | C6 | C5 | H51 | 0.4° | 0.0° |
| H3 | OP2 | P | OP3 | 108.4° | 118.6° |
| H3 | OP2 | P | H4 | 108.4° | 151.4° |
| H4 | P | OP3 | H5 | 90.0° | 60.0° |
