Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

YNL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C23C22doub1.38Å1.39ÅAromatic
C23C21sing1.38Å1.38ÅAromatic
C22C20sing1.38Å1.39ÅAromatic
C21C19doub1.38Å1.39ÅAromatic
C20C16doub1.39Å1.39ÅAromatic
C19C16sing1.40Å1.39ÅAromatic
C19F02sing1.35Å1.34Å
C16C10sing1.48Å1.52Å
N05C10doub1.29Å1.26Å
N05C12sing1.46Å1.46Å
C10C08sing1.47Å1.49Å
C12C11sing1.51Å1.50Å
O03C11doub1.21Å1.22Å
C11N04sing1.34Å1.34Å
C08C15doub1.40Å1.38ÅAromatic
C08C07sing1.39Å1.40ÅAromatic
C15C18sing1.38Å1.38ÅAromatic
N04C07sing1.39Å1.43Å
N04C09sing1.47Å1.47Å
C07C13doub1.40Å1.39ÅAromatic
C09C14sing1.53Å1.53Å
C14N06sing1.47Å1.48Å
C18CL01sing1.74Å1.79Å
C18C17doub1.39Å1.38ÅAromatic
C13C17sing1.38Å1.37ÅAromatic
C09H091sing1.09Å1.10Å
C09H092sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C12H121sing1.09Å1.10Å
C13H131sing1.08Å1.08Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C15H151sing1.08Å1.08Å
C17H171sing1.08Å1.08Å
C20H201sing1.08Å1.08Å
C21H211sing1.08Å1.08Å
C22H221sing1.08Å1.08Å
C23H231sing1.08Å1.08Å
N06H062sing1.01Å1.00Å
N06H1sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C22C23C21118.8°120.3°
C23C22C20120.7°120.2°
C23C22H221119.7°119.9°
C22C23H231120.6°119.8°
C23C21C19120.7°120.1°
C23C21H211119.6°120.0°
C21C23H231120.6°119.8°
C22C20C16120.7°119.9°
C22C20H201119.7°120.0°
C20C22H221119.6°119.9°
C21C19C16120.7°119.8°
C21C19F02118.3°120.1°
C19C21H211119.6°119.9°
C20C16C19118.4°119.7°
C20C16C10116.3°120.1°
C16C20H201119.7°120.1°
C16C19F02120.9°120.1°
C19C16C10125.3°120.1°
C16C10N05119.5°117.6°
C16C10C08124.1°117.5°
C10N05C12127.5°121.9°
N05C10C08116.0°124.9°
N05C12C11106.8°108.9°
N05C12H122110.1°109.2°
N05C12H121110.1°110.1°
C10C08C15115.5°117.6°
C10C08C07124.2°123.1°
C12C11O03116.1°118.9°
C12C11N04120.5°121.9°
C11C12H122110.1°109.6°
C11C12H121110.1°109.6°
O03C11N04123.3°119.2°
C11N04C07119.6°124.7°
C11N04C09117.9°117.4°
C15C08C07120.2°119.3°
C08C15C18121.3°120.5°
C08C15H151119.4°119.7°
C08C07N04124.2°123.3°
C08C07C13117.3°119.4°
C15C18CL01119.3°120.0°
C15C18C17119.2°120.0°
C18C15H151119.4°119.8°
C07N04C09122.6°117.8°
N04C07C13118.5°117.3°
N04C09C14113.3°109.5°
N04C09H091108.5°109.5°
N04C09H092108.5°109.5°
C07C13C17122.2°120.7°
C07C13H131118.9°119.6°
C09C14N06112.9°109.5°
C14C09H091108.5°109.5°
C14C09H092108.5°109.4°
C09C14H142108.6°109.5°
C09C14H141108.6°109.5°
N06C14H142108.6°109.4°
N06C14H141108.6°109.5°
C14N06H062109.5°111.1°
C14N06H1109.4°111.0°
CL01C18C17121.5°120.0°
C18C17C13119.9°120.1°
C18C17H171120.1°119.9°
C17C13H131118.9°119.7°
C13C17H171120.0°119.9°
H091C09H092109.4°109.5°
H122C12H121109.5°109.6°
H142C14H141109.5°109.4°
H062N06H1109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C22C23C21H231180.0°179.8°
C23C22C20H221180.0°180.0°
C22C23C21C190.5°0.3°
C23C22C20C160.8°0.0°
C23C22C20H201179.2°180.0°
C22C23C21H211179.4°179.8°
C21C23C22C200.2°0.3°
C23C21C19H211180.0°179.9°
C23C21C19C160.1°0.0°
C23C21C19F02179.6°179.9°
C21C23C22H221179.8°179.7°
C22C20C16H201180.0°180.0°
C22C20C16C191.4°0.3°
C22C20C16C10179.6°180.0°
C20C22C23H231179.8°180.0°
C21C19C16C201.0°0.3°
C21C19C16F02179.5°179.9°
C21C19C16C10179.1°180.0°
C19C21C23H231179.5°180.0°
C20C16C19C10178.0°179.7°
C20C16C19F02179.4°179.8°
C20C16C10N0531.6°65.4°
C20C16C10C08141.6°114.4°
C16C20C22H221179.2°180.0°
C19C16C10N05150.4°114.9°
C19C16C10C0836.5°65.4°
C19C16C20H201178.6°179.7°
C16C19C21H211179.9°180.0°
F02C19C16C101.4°0.1°
F02C19C21H2110.4°0.0°
C16C10N05C08173.7°179.7°
C16C10N05C12178.4°179.9°
C16C10C08C1541.1°40.3°
C16C10C08C07142.4°139.7°
C10C16C20H2010.4°0.0°
C10N05C12C1165.9°63.7°
N05C10C08C15132.2°139.5°
N05C10C08C0744.2°40.6°
C10N05C12H12253.7°55.9°
C10N05C12H121174.5°176.2°
C12N05C10C084.7°0.3°
N05C12C11H122119.6°119.3°
N05C12C11H121119.6°120.5°
N05C12C11O03112.0°116.3°
N05C12C11N0468.4°62.9°
N05C12H122H121121.2°120.7°
C10C08C15C07176.6°180.0°
C10C08C15C18178.0°179.9°
C10C08C07N042.9°0.4°
C10C08C07C13177.8°179.9°
C10C08C15H1512.0°0.1°
C12C11O03N04179.6°179.2°
C12C11N04C070.0°3.6°
C12C11N04C09178.1°177.3°
C11C12H122H121121.2°120.2°
O03C11N04C07179.6°177.2°
O03C11N04C091.5°1.9°
O03C11C12H122128.4°124.3°
O03C11C12H1217.6°4.1°
C11N04C07C0844.9°41.1°
C11N04C07C09177.9°179.1°
C11N04C07C13135.8°139.1°
C11N04C09C14140.5°84.8°
C11N04C09H09198.9°155.2°
C11N04C09H09219.9°35.1°
N04C11C12H12251.2°56.5°
N04C11C12H121172.0°176.7°
C08C15C18H151180.0°180.0°
C15C08C07N04179.3°179.6°
C15C08C07C131.5°0.2°
C08C15C18CL01179.5°180.0°
C08C15C18C170.5°0.0°
C07C08C15C181.4°0.1°
C08C07N04C13179.3°179.8°
C08C07N04C09137.1°139.8°
C08C07C13C170.8°0.1°
C08C07C13H131179.2°179.9°
C07C08C15H151178.7°179.9°
C15C18CL01C17180.0°180.0°
C15C18C17C130.2°0.1°
C15C18C17H171179.9°179.9°
C07N04C09C1441.5°96.0°
N04C07C13C17179.9°179.7°
C07N04C09H09179.1°24.0°
C07N04C09H092162.1°144.1°
N04C07C13H1310.1°0.3°
C09N04C07C1342.1°40.0°
N04C09C14H091120.6°120.0°
N04C09C14H092120.6°120.0°
N04C09C14N06110.6°175.0°
N04C09H091H092118.2°120.0°
N04C09C14H142128.9°55.0°
N04C09C14H1419.9°64.9°
C07C13C17C180.0°0.1°
C07C13C17H131180.0°179.9°
C07C13C17H171180.0°179.9°
C09C14N06H142120.5°120.1°
C09C14N06H141120.5°120.1°
C14C09H091H092118.3°120.0°
C09C14H142H141118.4°120.0°
C09C14N06H062180.0°180.0°
C09C14N06H160.0°56.0°
N06C14C09H09110.0°55.0°
N06C14C09H092128.8°65.0°
N06C14H142H141118.4°119.9°
C14N06H062H1120.0°124.0°
CL01C18C17C13179.9°179.9°
CL01C18C15H1510.5°0.0°
CL01C18C17H1710.1°0.1°
C18C17C13H171180.0°179.8°
C18C17C13H131180.0°180.0°
C17C18C15H151179.5°180.0°
H091C09C14H142110.5°64.9°
H091C09C14H141130.5°175.1°
H092C09C14H1428.3°175.0°
H092C09C14H141110.7°55.0°
H131C13C17H1710.0°0.1°
H142C14N06H06259.5°59.9°
H142C14N06H1179.5°176.1°
H141C14N06H06259.5°60.0°
H141C14N06H160.5°64.0°
H201C20C22H2210.8°0.0°
H211C21C23H2310.6°0.0°
H221C22C23H2310.2°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon