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YD7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6C4sing1.53Å1.50Å
C4O2sing1.43Å1.44Å
C4C5sing1.53Å1.50Å
O2C3sing1.43Å1.39Å
C3C7sing1.53Å1.58Å
C3C2sing1.53Å1.57Å
C7N2sing1.47Å1.47Å
C2N2sing1.47Å1.47Å
N2C1sing1.35Å1.36Å
O1C1doub1.22Å1.24Å
C1N1sing1.35Å1.35Å
N1C8sing1.47Å1.46Å
C8C14sing1.51Å1.52Å
C8C9sing1.53Å1.54Å
C15C14doub1.38Å1.40ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C14C13sing1.37Å1.41ÅAromatic
C9C10sing1.52Å1.53Å
C16C17doub1.39Å1.40ÅAromatic
C10C11sing1.52Å1.53Å
C13C12sing1.51Å1.52Å
C13C26doub1.38Å1.39ÅAromatic
C12C11sing1.53Å1.52Å
C17C26sing1.39Å1.40ÅAromatic
C17C18sing1.48Å1.49Å
C25C18doub1.40Å1.38ÅAromatic
C25C24sing1.38Å1.38ÅAromatic
C18N3sing1.33Å1.34ÅAromatic
C24N7doub1.32Å1.33ÅAromatic
N3C19doub1.32Å1.34ÅAromatic
N7C19sing1.32Å1.34ÅAromatic
C19N4sing1.38Å1.39Å
N4C20sing1.41Å1.41Å
C21C20doub1.36Å1.38ÅAromatic
C21N5sing1.36Å1.35ÅAromatic
C20C23sing1.40Å1.39ÅAromatic
C22N5sing1.47Å1.46Å
N5N6sing1.40Å1.36ÅAromatic
C23N6doub1.31Å1.32ÅAromatic
N1H1sing0.97Å1.00Å
C4H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
C8H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
C10H13sing1.09Å1.10Å
C15H14sing1.08Å1.08Å
C21H15sing1.08Å1.08Å
C22H16sing1.09Å1.10Å
C22H17sing1.09Å1.10Å
C22H18sing1.09Å1.10Å
C24H19sing1.08Å1.08Å
C26H20sing1.08Å1.08Å
C11H21sing1.09Å1.10Å
C11H22sing1.09Å1.10Å
C12H23sing1.09Å1.10Å
C12H24sing1.09Å1.10Å
C16H25sing1.08Å1.08Å
C2H26sing1.09Å1.10Å
C2H27sing1.09Å1.10Å
C23H28sing1.08Å1.08Å
C25H29sing1.08Å1.08Å
C3H30sing1.09Å1.10Å
C9H31sing1.09Å1.10Å
C9H32sing1.09Å1.10Å
N4H33sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C4O2104.8°109.4°
C6C4C5112.3°109.5°
C6C4H2109.7°109.5°
C4C6H6109.5°109.5°
C4C6H7109.5°109.4°
C4C6H8109.5°109.5°
O2C4C5109.9°109.5°
C4O2C3119.9°114.0°
O2C4H2110.5°109.5°
C5C4H2109.6°109.5°
C4C5H3109.5°109.5°
C4C5H4109.5°109.5°
C4C5H5109.5°109.5°
O2C3C7115.6°114.2°
O2C3C2118.0°114.2°
O2C3H30111.6°113.4°
C7C3C292.0°83.3°
C3C7N282.5°88.0°
C3C7H9115.7°113.5°
C3C7H10115.7°113.5°
C7C3H30108.8°114.2°
C3C2N283.0°88.0°
C3C2H26115.6°113.5°
C3C2H27115.6°113.5°
C2C3H30109.1°114.2°
C7N2C2101.0°87.9°
C7N2C1128.8°136.0°
N2C7H9115.7°113.5°
N2C7H10115.7°113.5°
C2N2C1130.3°136.0°
N2C2H26115.6°113.4°
N2C2H27115.6°113.5°
N2C1O1120.3°120.0°
N2C1N1117.8°120.0°
O1C1N1121.9°120.0°
C1N1C8122.8°119.9°
C1N1H1118.6°120.0°
N1C8C14111.5°109.7°
N1C8C9108.9°109.6°
C8N1H1118.7°120.0°
N1C8H11109.3°109.6°
C14C8C9110.2°108.5°
C8C14C15121.6°119.4°
C8C14C13120.0°120.1°
C14C8H11108.5°109.7°
C8C9C10115.5°111.0°
C9C8H11108.3°109.8°
C8C9H31108.0°109.2°
C8C9H32108.0°109.2°
C14C15C16121.4°119.8°
C15C14C13118.4°120.5°
C14C15H14119.3°120.1°
C15C16C17120.5°119.9°
C16C15H14119.3°120.2°
C15C16H25119.8°120.0°
C14C13C12121.1°120.2°
C14C13C26119.5°120.4°
C9C10C11117.2°114.4°
C9C10H12107.5°108.5°
C9C10H13107.5°108.5°
C10C9H31107.9°109.1°
C10C9H32107.9°109.2°
C16C17C26118.0°119.8°
C16C17C18121.1°120.1°
C17C16H25119.8°120.1°
C10C11C12112.5°110.9°
C11C10H12107.5°108.5°
C11C10H13107.5°108.5°
C10C11H21108.7°109.1°
C10C11H22108.7°109.2°
C12C13C26119.4°119.4°
C13C12C11113.6°108.5°
C13C12H23108.4°109.6°
C13C12H24108.4°109.7°
C13C26C17122.1°119.6°
C13C26H20118.9°120.2°
C12C11H21108.7°109.2°
C12C11H22108.7°109.2°
C11C12H23108.4°109.6°
C11C12H24108.4°109.7°
C26C17C18120.9°120.1°
C17C26H20118.9°120.2°
C17C18C25123.1°120.5°
C17C18N3115.9°120.5°
C18C25C24116.6°118.5°
C25C18N3120.9°118.9°
C18C25H29121.7°120.8°
C25C24N7123.5°119.3°
C25C24H19118.3°120.4°
C24C25H29121.7°120.8°
C18N3C19118.4°120.6°
C24N7C19116.5°121.0°
N7C24H19118.3°120.3°
N3C19N7124.2°121.7°
N3C19N4118.8°119.1°
N7C19N4116.9°119.1°
C19N4C20128.4°120.0°
C19N4H33115.8°120.0°
N4C20C21127.9°126.1°
N4C20C23127.0°126.1°
C20N4H33115.8°120.0°
C20C21N5106.3°107.5°
C21C20C23105.1°107.9°
C20C21H15126.8°126.2°
C21N5C22128.1°126.0°
C21N5N6112.0°107.9°
N5C21H15126.8°126.3°
C20C23N6112.2°108.3°
C20C23H28123.9°125.9°
C22N5N6119.9°126.0°
N5C22H16109.5°109.5°
N5C22H17109.5°109.5°
N5C22H18109.5°109.5°
N5N6C23104.4°108.4°
N6C23H28123.9°125.8°
H3C5H4109.5°109.5°
H3C5H5109.5°109.5°
H4C5H5109.4°109.4°
H6C6H7109.5°109.4°
H6C6H8109.5°109.5°
H7C6H8109.5°109.5°
H9C7H10109.5°112.7°
H12C10H13109.5°108.3°
H16C22H17109.5°109.5°
H16C22H18109.5°109.4°
H17C22H18109.5°109.4°
H21C11H22109.5°109.1°
H23C12H24109.5°109.8°
H26C2H27109.5°112.8°
H31C9H32109.4°109.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C4O2C5120.8°120.0°
C6C4O2H2118.0°120.0°
C6C4C5H2122.1°120.1°
C6C4O2C3177.4°150.0°
C6C4C5H3180.0°180.0°
C6C4C5H460.0°59.9°
C6C4C5H560.0°60.0°
C4C6H6H7120.0°119.9°
C4C6H6H8120.0°120.1°
C4C6H7H8120.0°120.0°
O2C4C5H2121.6°120.0°
C4O2C3C7162.8°150.0°
C4O2C3C255.4°116.4°
O2C4C5H363.7°60.1°
O2C4C5H456.3°60.0°
O2C4C5H5176.2°180.0°
O2C4C6H6180.0°60.1°
O2C4C6H760.0°180.0°
O2C4C6H860.0°60.0°
C4O2C3H3072.1°16.8°
C5C4O2C361.8°90.0°
C4C5H3H4120.0°120.1°
C4C5H3H5120.0°120.0°
C4C5H4H5120.0°120.0°
C5C4C6H660.7°180.0°
C5C4C6H759.3°60.0°
C5C4C6H8179.3°59.9°
O2C3C7C2122.5°113.6°
O2C3C7H30126.5°132.8°
O2C3C2H30128.7°132.8°
O2C3C7N2131.6°139.7°
O2C3C2N2129.6°139.7°
C3O2C4H259.3°30.0°
O2C3C7H916.6°24.8°
O2C3C7H10113.4°105.5°
O2C3C2H26115.3°105.6°
O2C3C2H2714.5°24.9°
C7C3C2H30110.7°113.6°
C3C7N2H9115.0°114.8°
C3C7N2H10115.0°114.9°
C7C3C2N29.0°26.1°
C3C7N2C1169.6°152.9°
C3C7H9H10133.0°130.8°
C7C3C2H26124.2°140.8°
C7C3C2H27106.1°88.7°
C3C2N2H26115.1°114.8°
C3C2N2H27115.1°114.8°
C3C2N2C1169.5°152.9°
C2C3C7H9105.9°88.7°
C2C3C7H10124.0°140.9°
C3C2H26H27132.7°130.8°
C7N2C2C1179.4°180.0°
C7N2C1O13.1°0.1°
C7N2C1N1174.9°180.0°
N2C7H9H10133.0°130.8°
C7N2C2H26125.0°141.9°
C7N2C2H27105.2°87.7°
N2C7C3H30101.9°87.5°
C2N2C1O1177.6°179.9°
C2N2C1N14.4°0.0°
C2N2C7H9105.1°87.7°
C2N2C7H10124.8°142.0°
N2C2H26H27132.7°130.8°
N2C2C3H30101.7°87.5°
N2C1O1N1177.9°179.9°
N2C1N1C8179.6°179.9°
N2C1N1H10.4°0.3°
C1N2C7H975.4°92.3°
C1N2C7H1054.7°38.0°
C1N2C2H2654.4°38.1°
C1N2C2H2775.4°92.3°
O1C1N1C81.6°0.0°
O1C1N1H1178.4°179.8°
C1N1C8H1180.0°179.8°
C1N1C8C1477.1°78.8°
C1N1C8C9161.0°162.2°
C1N1C8H1142.8°41.7°
N1C8C14C9121.1°119.7°
N1C8C14H11120.4°120.4°
N1C8C9H11118.8°120.4°
N1C8C14C158.3°131.0°
N1C8C14C13172.7°49.0°
N1C8C9C10155.6°34.0°
N1C8C9H3183.5°86.3°
N1C8C9H3234.7°154.5°
C14C8C9H11118.6°119.8°
C8C14C15C13179.0°180.0°
C8C14C15C16179.4°180.0°
C14C8C9C1081.7°85.7°
C8C14C13C120.3°0.0°
C8C14C13C26179.0°180.0°
C14C8N1H1102.8°101.5°
C8C14C15H140.6°0.0°
C14C8C9H3139.1°154.0°
C14C8C9H32157.4°34.7°
C9C8C14C15112.8°109.3°
C9C8C14C1366.2°70.7°
C8C9C10H31120.9°120.4°
C8C9C10H32120.9°120.4°
C8C9C10C1162.4°68.2°
C9C8N1H119.0°17.5°
C8C9C10H12176.5°170.6°
C8C9C10H1358.7°53.1°
C8C9H31H32117.3°119.3°
C14C15C16H14180.0°179.9°
C14C15C16C170.8°0.0°
C15C14C13C12179.3°179.9°
C15C14C13C260.0°0.0°
C15C14C8H11128.8°10.5°
C14C15C16H25179.2°180.0°
C16C15C14C130.4°0.0°
C15C16C17H25180.0°180.0°
C15C16C17C260.8°0.0°
C15C16C17C18176.5°180.0°
C14C13C12C26179.3°179.9°
C14C13C12C1169.3°70.8°
C14C13C26C170.0°0.0°
C13C14C8H1152.3°169.4°
C13C14C15H14179.6°179.9°
C14C13C26H20180.0°180.0°
C14C13C12H2351.3°169.6°
C14C13C12H24170.1°49.0°
C9C10C11H12121.1°121.3°
C9C10C11H13121.1°121.2°
C9C10C11C1258.7°68.1°
C10C9C8H1136.9°154.5°
C9C10H12H13116.5°117.6°
C9C10C11H2161.7°171.4°
C9C10C11H22179.2°52.2°
C10C9H31H32117.2°119.2°
C16C17C26C130.4°0.0°
C16C17C26C18177.3°180.0°
C16C17C18C2529.9°0.0°
C16C17C18N3145.1°180.0°
C17C16C15H14179.2°179.9°
C16C17C26H20179.6°180.0°
C10C11C12C1379.3°85.7°
C10C11C12H21120.4°120.3°
C10C11C12H22120.4°120.4°
C11C10H12H13116.5°117.6°
C10C11H21H22118.6°119.2°
C10C11C12H2341.3°154.7°
C10C11C12H24160.1°34.1°
C11C10C9H3158.5°171.5°
C11C10C9H32176.7°52.3°
C13C12C11H23120.6°119.7°
C13C12C11H24120.6°119.7°
C12C13C26C17179.3°179.9°
C12C13C26H200.7°0.0°
C13C12C11H2141.1°154.0°
C13C12C11H22160.2°34.7°
C13C12H23H24118.1°120.5°
C26C13C12C11110.1°109.3°
C13C26C17H20180.0°180.0°
C13C26C17C18176.9°180.0°
C26C13C12H23129.3°10.4°
C26C13C12H2410.5°131.0°
C12C11C10H12179.8°170.6°
C12C11C10H1362.4°53.1°
C12C11H21H22118.7°119.3°
C11C12H23H24118.1°120.5°
C26C17C18C25152.9°180.0°
C26C17C18N332.1°0.0°
C26C17C16H25179.2°180.0°
C17C18C25N3174.7°180.0°
C17C18C25C24175.9°180.0°
C17C18N3C19175.9°180.0°
C18C17C26H203.1°0.0°
C18C17C16H253.5°0.0°
C17C18C25H294.1°0.0°
C18C25C24H29180.0°179.9°
C18C25C24N71.0°0.1°
C25C18N3C190.8°0.0°
C18C25C24H19179.0°180.0°
C24C25C18N31.2°0.1°
C25C24N7H19180.0°179.9°
C25C24N7C190.4°0.0°
C18N3C19N70.2°0.0°
C18N3C19N4180.0°180.0°
N3C18C25H29178.8°180.0°
C24N7C19N30.1°0.0°
C24N7C19N4179.8°180.0°
N7C24C25H29179.0°180.0°
N3C19N7N4179.9°180.0°
N3C19N4C204.2°180.0°
N3C19N4H33175.8°0.0°
N7C19N4C20175.7°0.0°
C19N7C24H19179.6°180.0°
N7C19N4H334.3°180.0°
C19N4C20H33180.0°179.9°
C19N4C20C212.2°179.7°
C19N4C20C23179.5°0.0°
N4C20C21C23178.6°179.7°
N4C20C21N5178.5°179.8°
N4C20C23N6178.3°179.7°
N4C20C21H151.5°0.3°
N4C20C23H281.7°0.2°
C20C21N5H15180.0°179.9°
C20C21N5C22179.9°180.0°
C20C21N5N60.1°0.0°
C21C20C23N60.3°0.0°
C21C20C23H28179.7°179.9°
C21C20N4H33177.8°0.3°
N5C21C20C230.1°0.0°
C21N5C22N6179.9°179.9°
C21N5N6C230.3°0.0°
C21N5C22H16179.9°90.0°
C21N5C22H1760.1°150.0°
C21N5C22H1859.9°30.1°
C20C23N6N50.4°0.0°
C20C23N6H28180.0°179.9°
C23C20C21H15179.9°179.9°
C23C20N4H330.5°180.0°
C22N5N6C23179.7°180.0°
C22N5C21H150.1°0.1°
N5C22H16H17120.0°120.0°
N5C22H16H18120.0°120.0°
N5C22H17H18120.0°120.0°
N6N5C21H15179.9°179.9°
N6N5C22H160.0°90.0°
N6N5C22H17120.0°30.1°
N6N5C22H18120.0°150.0°
N5N6C23H28179.6°179.9°
H1N1C8H11137.2°138.1°
H2C4C5H357.9°59.9°
H2C4C5H4177.9°180.0°
H2C4C5H562.2°60.1°
H2C4C6H661.4°59.9°
H2C4C6H7178.6°60.0°
H2C4C6H858.6°NaN°
H3C5H4H5120.0°120.0°
H6C6H7H8120.0°120.0°
H9C7C3H30143.1°157.7°
H10C7C3H3013.1°27.3°
H11C8C9H31157.7°34.2°
H11C8C9H3284.1°85.1°
H12C10C11H2159.4°50.2°
H12C10C11H2259.7°69.0°
H12C10C9H3162.6°50.2°
H12C10C9H3255.6°69.0°
H13C10C11H21177.2°67.3°
H13C10C11H2258.0°173.5°
H13C10C9H31179.6°67.3°
H13C10C9H3262.2°173.5°
H14C15C16H250.8°0.1°
H16C22H17H18120.0°119.9°
H19C24C25H291.0°0.1°
H21C11C12H23161.7°34.3°
H21C11C12H2479.5°86.3°
H22C11C12H2379.2°84.9°
H22C11C12H2439.6°154.5°
H26C2C3H3013.4°27.2°
H27C2C3H30143.2°157.7°

223532

PDB entries from 2024-08-07

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