Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Obsolete: XYT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O11C9sing1.43Å1.46Å
O13C11sing1.43Å1.34Å
OCsing1.43Å1.36Å
C10C9sing1.53Å1.58Å
C10O12sing1.43Å1.49Å
C10C11sing1.53Å1.53Å
C7C9sing1.53Å1.53Å
C7C8sing1.53Å1.51Å
C7O6sing1.43Å1.41Å
C8O7sing1.43Å1.44Å
C11C6sing1.53Å1.50Å
C6O6sing1.43Å1.40Å
C6O5sing1.43Å1.42Å
CC1sing1.53Å1.49Å
O5C5sing1.43Å1.41Å
C5C1sing1.53Å1.51Å
C5C4sing1.53Å1.54Å
O7Psing1.61Å1.66Å
O8Pdoub1.48Å1.55Å
C1O1sing1.43Å1.40Å
O10Psing1.61Å1.39Å
O1C2sing1.43Å1.42Å
PO9sing1.61Å1.46Å
O4C4sing1.43Å1.43Å
C4C3sing1.53Å1.53Å
C3C2sing1.53Å1.53Å
C3O3sing1.43Å1.43Å
C2O2sing1.43Å1.45Å
O9H1sing0.97Å0.95Å
O10H2sing0.97Å0.95Å
C8H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C9H6sing1.09Å1.10Å
O11H7sing0.97Å0.95Å
C10H8sing1.09Å1.10Å
O12H9sing0.97Å0.95Å
C11H10sing1.09Å1.10Å
O13H11sing0.97Å0.95Å
C6H12sing1.09Å1.10Å
C5H13sing1.09Å1.10Å
C4H14sing1.09Å1.10Å
O4H15sing0.97Å0.95Å
C3H16sing1.09Å1.10Å
O3H17sing0.97Å0.95Å
C2H18sing1.09Å1.10Å
O2H19sing0.97Å0.95Å
C1H20sing1.09Å1.10Å
CH21sing1.09Å1.10Å
CH22sing1.09Å1.10Å
OH23sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O11C9C10116.4°109.5°
O11C9C7103.8°109.6°
O11C9H6110.4°109.5°
C9O11H7109.5°114.0°
O13C11C10103.3°109.6°
O13C11C6103.1°109.5°
O13C11H10111.4°109.5°
C11O13H11109.5°114.0°
OCC1109.8°109.5°
OCH21109.4°109.5°
OCH22109.4°109.4°
COH23109.5°114.0°
C9C10O12124.4°109.5°
C9C10C11109.5°109.0°
C10C9C7107.8°109.2°
C10C9H6108.8°109.5°
C9C10H8105.6°109.5°
O12C10C11103.4°109.6°
O12C10H8106.6°109.6°
C10O12H9109.5°114.0°
C10C11C6121.1°109.2°
C11C10H8106.1°109.6°
C10C11H10108.6°109.5°
C9C7C8113.5°109.5°
C9C7O6112.5°109.4°
C9C7H5107.1°109.5°
C7C9H6109.4°109.5°
C8C7O6107.6°109.5°
C7C8O7110.1°109.5°
C7C8H3109.3°109.5°
C7C8H4109.3°109.5°
C8C7H5107.3°109.5°
C7O6C6109.5°114.1°
O6C7H5108.7°109.5°
C8O7P123.5°123.0°
O7C8H3109.3°109.5°
O7C8H4109.3°109.4°
C11C6O6109.3°109.4°
C11C6O5106.6°109.5°
C6C11H10109.0°109.5°
C11C6H12109.0°109.5°
O6C6O5111.4°109.5°
O6C6H12110.4°109.5°
C6O5C5112.4°114.0°
O5C6H12110.1°109.5°
CC1C5122.1°109.5°
CC1O193.8°109.5°
CC1H20111.2°109.5°
C1CH21109.4°109.5°
C1CH22109.4°109.5°
O5C5C1103.2°109.5°
O5C5C4107.4°109.6°
O5C5H13112.7°109.5°
C1C5C4111.4°109.1°
C5C1O1104.6°109.4°
C1C5H13111.1°109.5°
C5C1H20110.9°109.4°
C5C4O4111.4°109.6°
C5C4C3111.7°109.0°
C4C5H13110.7°109.6°
C5C4H14107.0°109.5°
O7PO8101.4°109.5°
O7PO10113.9°109.4°
O7PO9103.7°109.4°
O8PO10100.9°109.5°
O8PO9128.8°109.5°
C1O1C2111.2°114.1°
O1C1H20112.6°109.5°
O10PO9108.4°109.5°
PO10H2109.5°114.0°
O1C2C399.7°109.4°
O1C2O2107.5°109.5°
O1C2H18109.5°109.5°
PO9H1109.5°114.0°
O4C4C3111.1°109.5°
O4C4H14108.3°109.5°
C4O4H15109.5°113.9°
C4C3C2103.9°109.1°
C4C3O3111.6°109.5°
C3C4H14107.1°109.6°
C4C3H16107.2°109.6°
C2C3O3117.9°109.5°
C3C2O2122.0°109.5°
C2C3H16107.3°109.5°
C3C2H18108.1°109.5°
O3C3H16108.5°109.6°
C3O3H17109.5°113.9°
O2C2H18109.2°109.5°
C2O2H19109.5°113.9°
H3C8H4109.5°109.4°
H21CH22109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O11C9C10C7116.0°120.0°
O11C9C10H6125.5°120.1°
O11C9C10O1283.2°63.2°
O11C9C10C11154.2°176.9°
O11C9C7H6117.9°120.2°
O11C9C7C853.3°62.5°
O11C9C7O6175.8°177.5°
O11C9C7H564.9°57.5°
O11C9C10H840.2°57.0°
O13C11C10C9148.5°176.9°
O13C11C10O1277.1°63.2°
O13C11C10C6114.5°120.0°
O13C11C10H10118.3°120.1°
O13C11C6H10118.5°120.1°
O13C11C6O6158.5°177.6°
O13C11C6O581.0°62.4°
O13C11C10H834.9°57.0°
O13C11C6H1237.8°57.6°
OCC1H21120.1°120.0°
OCC1H22120.0°119.9°
OCC1C573.7°175.0°
OCC1O1176.4°65.1°
OCC1H2060.4°55.0°
OCH21H22119.8°120.0°
C9C10O12C11125.3°119.6°
C9C10O12H8123.0°120.2°
C9C10C11H8113.6°119.9°
C10C9C7H6118.1°119.9°
C10C9C7C8177.3°177.6°
C10C9C7O660.2°57.6°
C9C10C11C634.0°56.9°
C10C9C7H559.1°62.4°
C10C9O11H7180.0°60.0°
C9C10O12H9180.0°180.0°
C9C10C11H1093.2°63.0°
O12C10C11H8112.0°120.3°
O12C10C9C7160.8°176.9°
O12C10C11C6168.4°176.8°
O12C10C9H642.3°56.9°
O12C10C11H1041.2°56.9°
C11C10C9C738.1°57.0°
C10C11C6H10127.0°119.9°
C10C11C6O643.9°57.6°
C10C11C6O5164.4°177.6°
C11C10C9H680.4°63.0°
C11C10O12H954.6°60.4°
C10C11O13H11180.0°179.7°
C10C11C6H1276.8°62.4°
C9C7C8O6125.1°119.9°
C9C7C8H5118.1°120.0°
C9C7O6H5118.4°120.0°
C9C7C8O757.2°175.0°
C9C7O6C673.5°61.2°
C9C7C8H3177.3°55.0°
C9C7C8H462.8°65.0°
C7C9O11H761.8°179.7°
C7C9C10H875.8°62.9°
C8C7O6H5115.9°120.0°
C7C8O7H3120.1°120.1°
C7C8O7H4120.1°120.0°
C8C7O6C6160.8°178.8°
C7C8O7P173.4°180.0°
C7C8H3H4119.7°120.0°
C8C7C9H664.6°57.7°
O6C7C8O767.9°65.0°
C7O6C6C1160.1°61.1°
C7O6C6O5177.6°178.8°
O6C7C8H352.2°174.9°
O6C7C8H4172.0°54.9°
O6C7C9H657.9°62.3°
C7O6C6H1259.8°58.8°
C8O7PO829.1°55.0°
C8O7PO1078.3°175.0°
C8O7PO9164.1°65.1°
O7C8H3H4119.7°119.9°
O7C8C7H5175.3°55.0°
C11C6O6O5117.5°120.0°
C11C6O6H12119.8°120.0°
C11C6O5H12118.1°120.0°
C11C6O5C5169.3°175.1°
C6C11C10H879.6°62.9°
C6C11O13H1153.1°59.9°
O6C6O5H12122.8°120.0°
O6C6O5C550.2°65.0°
C6O6C7H544.9°58.8°
O6C6C11H1083.0°62.3°
C6O5C5C1143.4°150.0°
C6O5C5C498.7°90.3°
O5C6C11H1037.4°57.7°
C6O5C5H1323.5°29.9°
CC1C5O591.0°62.5°
CC1C5O1104.2°120.0°
CC1C5H20134.2°120.0°
CC1C5C4154.0°177.6°
CC1O1H20114.9°120.1°
CC1O1C2163.1°178.9°
CC1C5H1330.1°57.7°
C1CH21H22119.9°120.0°
C1COH23180.0°180.0°
O5C5C1C4115.0°119.9°
O5C5C1H13121.0°120.1°
O5C5C4H13123.5°120.2°
O5C5C1O1164.8°177.6°
O5C5C4O475.2°63.2°
O5C5C4C3159.8°176.9°
C5O5C6H1272.6°55.1°
O5C5C4H1442.9°57.0°
O5C5C1H2043.2°57.5°
C1C5C4H13124.2°119.9°
C5C1O1H20120.5°120.0°
C5C1O1C272.3°61.1°
C1C5C4O4172.4°176.9°
C1C5C4C347.5°57.0°
C1C5C4H1469.4°62.9°
C5C1CH21166.3°55.0°
C5C1CH2246.3°65.1°
C4C5C1O149.9°57.6°
C5C4O4C3125.3°119.6°
C5C4O4H14117.4°120.2°
C5C4C3H14116.8°119.9°
C5C4C3C256.8°57.0°
C5C4C3O3175.2°176.9°
C5C4O4H15180.0°179.6°
C5C4C3H1656.5°62.9°
C4C5C1H2071.8°62.4°
O7PO8O10117.3°120.0°
O7PO8O9118.1°120.0°
O7PO10O9114.8°119.9°
O7PO9H1117.1°60.0°
O7PO10H2107.7°180.0°
PO7C8H353.4°59.9°
PO7C8H466.5°60.0°
O8PO10O9137.4°120.0°
O8PO9H10.0°179.9°
O8PO10H20.0°60.0°
C1O1C2C384.2°61.2°
C1O1C2O2147.7°178.9°
O1C1C5H1374.1°62.3°
C1O1C2H1829.2°58.8°
O1C1CH2156.4°174.9°
O1C1CH2263.6°54.9°
O10PO9H1121.5°59.9°
O1C2C3C469.7°57.6°
O1C2C3O2117.9°120.0°
O1C2C3H18114.4°120.0°
O1C2C3O3166.3°177.5°
O1C2O2H18118.8°120.0°
O1C2C3H1643.7°62.3°
O1C2O2H19180.0°60.1°
C2O1C1H2048.2°58.8°
O9PO10H2137.5°60.0°
O4C4C3H14118.1°120.2°
O4C4C3C2178.1°176.9°
O4C4C3O350.1°63.2°
O4C4C5H1348.2°57.0°
O4C4C3H1668.5°57.0°
C4C3C2O3124.0°119.9°
C4C3C2H16113.4°120.0°
C4C3O3H16117.9°120.2°
C4C3C2O2172.5°177.6°
C3C4C5H1376.7°62.9°
C3C4O4H1554.7°60.1°
C4C3O3H17180.0°179.6°
C4C3C2H1844.7°62.3°
C2C3O3H16122.1°120.2°
C3C2O2H18127.3°120.0°
C2C3C4H1460.0°62.9°
C2C3O3H1760.0°60.0°
C3C2O2H1966.0°180.0°
O3C3C2O248.5°62.5°
O3C3C4H1468.0°57.0°
O3C3C2H1879.2°57.5°
O2C2C3H1674.2°57.7°
H3C8C7H564.6°65.0°
H4C8C7H555.3°175.0°
H5C7C9H6177.2°177.7°
H6C9O11H755.4°60.1°
H6C9C10H8165.7°177.1°
H8C10O12H957.0°59.9°
H8C10C11H10153.2°177.2°
H10C11O13H1163.7°60.2°
H10C11C6H12156.3°177.7°
H13C5C4H14166.4°177.1°
H13C5C1H20164.3°177.6°
H14C4O4H1562.6°60.2°
H14C4C3H16173.4°177.2°
H16C3O3H1762.1°60.2°
H16C3C2H18158.1°177.7°
H18C2O2H1961.3°60.0°
H20C1CH2159.7°65.0°
H20C1CH22179.6°175.0°
H21COH2359.9°60.0°
H22COH2360.0°60.0°

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon