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SummaryGeometryRelated PDB entries

XXK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O15C16sing1.43Å1.42Å
O15C14sing1.43Å1.42Å
C16C17sing1.53Å1.53Å
C14C13sing1.53Å1.52Å
C17N12sing1.47Å1.47Å
C13N12sing1.47Å1.47Å
N12C11sing1.39Å1.41Å
O07C06sing1.35Å1.35ÅAromatic
O07C08sing1.35Å1.35ÅAromatic
N01C06doub1.33Å1.36ÅAromatic
N01C02sing1.32Å1.35ÅAromatic
C11C08doub1.40Å1.49ÅAromatic
C11N18sing1.33Å1.36ÅAromatic
C06C05sing1.40Å1.47ÅAromatic
C08C09sing1.40Å1.47ÅAromatic
C02C03doub1.38Å1.41ÅAromatic
N18C19doub1.33Å1.37ÅAromatic
C05C09sing1.47Å1.46ÅAromatic
C05C04doub1.39Å1.39ÅAromatic
C09N10doub1.33Å1.35ÅAromatic
C03C04sing1.38Å1.40ÅAromatic
C19N10sing1.32Å1.37ÅAromatic
C19C20sing1.48Å1.49Å
C26C20doub1.39Å1.39ÅAromatic
C26C24sing1.39Å1.39ÅAromatic
C20C21sing1.39Å1.39ÅAromatic
O25C24sing1.36Å1.36Å
C24C23doub1.39Å1.39ÅAromatic
C21C22doub1.39Å1.39ÅAromatic
C23C22sing1.39Å1.40ÅAromatic
C22N28sing1.40Å1.49Å
O25H1sing0.97Å0.95Å
C23H2sing1.08Å1.08Å
C21H3sing1.08Å1.08Å
C26H4sing1.08Å1.08Å
C04H5sing1.08Å1.08Å
C03H6sing1.08Å1.08Å
C02H7sing1.08Å1.08Å
C17H8sing1.09Å1.10Å
C17H9sing1.09Å1.10Å
C16H10sing1.09Å1.10Å
C16H11sing1.09Å1.10Å
C14H12sing1.09Å1.10Å
C14H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C13H15sing1.09Å1.10Å
N28H16sing0.97Å1.00Å
N28H17sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C16O15C14111.4°113.7°
O15C16C17112.2°109.3°
O15C16H10108.8°109.5°
O15C16H11108.8°109.6°
O15C14C13109.8°109.2°
O15C14H12109.4°109.5°
O15C14H13109.4°109.5°
C16C17N12112.7°109.3°
C16C17H8108.7°109.5°
C16C17H9108.7°109.6°
C17C16H10108.8°109.5°
C17C16H11108.8°109.5°
C14C13N12109.9°109.3°
C13C14H12109.4°109.5°
C13C14H13109.4°109.5°
C14C13H14109.4°109.5°
C14C13H15109.4°109.5°
C17N12C13124.6°110.7°
C17N12C11118.7°111.0°
N12C17H8108.7°109.5°
N12C17H9108.6°109.5°
C13N12C11116.7°111.0°
N12C13H14109.4°109.5°
N12C13H15109.4°109.5°
N12C11C08124.6°120.6°
N12C11N18120.0°120.6°
C06O07C08108.3°111.6°
O07C06N01129.2°132.1°
O07C06C05111.7°108.3°
O07C08C11131.5°133.3°
O07C08C09111.6°108.7°
C06N01C02118.1°121.8°
N01C06C05119.1°119.6°
N01C02C03123.7°121.5°
N01C02H7118.1°119.2°
C08C11N18115.3°118.9°
C11C08C09116.9°118.0°
C11N18C19124.3°121.2°
C06C05C09104.0°105.9°
C06C05C04122.8°119.7°
C08C09C05104.3°105.5°
C08C09N10122.8°119.5°
C02C03C04121.2°119.2°
C02C03H6119.4°120.4°
C03C02H7118.1°119.3°
N18C19N10123.2°121.9°
N18C19C20118.0°119.1°
C09C05C04133.2°134.4°
C05C09N10132.9°134.9°
C05C04C03115.0°118.1°
C05C04H5122.5°120.9°
C09N10C19117.5°120.5°
C03C04H5122.5°121.0°
C04C03H6119.4°120.4°
N10C19C20118.8°119.0°
C19C20C26118.4°120.0°
C19C20C21121.4°120.1°
C20C26C24120.2°120.0°
C26C20C21120.1°119.9°
C20C26H4119.9°120.0°
C26C24O25119.4°119.9°
C26C24C23119.8°120.1°
C24C26H4119.9°120.0°
C20C21C22119.7°119.9°
C20C21H3120.2°120.0°
O25C24C23120.9°120.0°
C24O25H1109.5°114.0°
C24C23C22120.0°120.2°
C24C23H2120.0°119.9°
C21C22C23120.2°120.0°
C21C22N28119.3°120.0°
C22C21H3120.2°120.1°
C23C22N28120.5°120.0°
C22C23H2120.0°119.9°
C22N28H16109.5°120.0°
C22N28H17109.4°120.1°
H8C17H9109.5°109.5°
H10C16H11109.4°109.5°
H12C14H13109.5°109.6°
H14C13H15109.5°109.5°
H16N28H17109.4°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O15C16C17H10120.4°119.9°
O15C16C17H11120.4°120.0°
C16O15C14C1372.7°58.6°
O15C16C17N129.1°56.8°
O15C16C17H8129.6°63.1°
O15C16C17H9111.4°176.8°
O15C16H10H11118.8°120.2°
C16O15C14H12167.2°178.6°
C16O15C14H1347.3°61.2°
C14O15C16C1756.7°58.7°
O15C14C13H12120.0°120.0°
O15C14C13H13120.0°119.9°
O15C14C13N1236.6°56.8°
C14O15C16H1063.8°178.6°
C14O15C16H11177.1°61.3°
O15C14H12H13119.8°120.1°
O15C14C13H1483.5°176.8°
O15C14C13H15156.6°63.1°
C16C17N12H8120.5°119.9°
C16C17N12H9120.5°120.0°
C16C17N12C1324.0°58.6°
C16C17N12C11157.3°177.6°
C16C17H8H9118.6°120.1°
C17C16H10H11118.8°120.0°
C14C13N12C179.8°58.6°
C14C13N12H14120.1°119.9°
C14C13N12H15120.1°119.9°
C14C13N12C11171.5°177.6°
C13C14H12H13119.9°120.1°
C14C13H14H15119.8°120.1°
C17N12C13C11178.7°123.8°
C17N12C11C0820.4°180.0°
C17N12C11N18159.8°0.7°
N12C17H8H9118.5°120.1°
N12C17C16H10111.3°176.8°
N12C17C16H11129.5°63.2°
C17N12C13H14129.9°178.5°
C17N12C13H15110.3°61.3°
C13N12C11C08160.8°56.3°
C13N12C11N1819.0°124.3°
C13N12C17H896.5°61.3°
C13N12C17H9144.5°178.6°
N12C13C14H12156.6°176.8°
N12C13C14H1383.5°63.1°
N12C13H14H15119.8°120.1°
N12C11C08O070.2°0.6°
N12C11C08N18179.8°179.4°
N12C11C08C09179.9°180.0°
N12C11N18C19179.7°179.8°
C11N12C17H882.2°62.5°
C11N12C17H936.8°57.6°
C11N12C13H1451.4°57.7°
C11N12C13H1568.5°62.4°
O07C06N01C05179.9°179.9°
O07C06N01C02179.9°179.8°
C06O07C08C11179.9°179.5°
C06O07C08C090.2°0.1°
O07C06C05C090.0°0.1°
O07C06C05C04179.9°179.8°
C08O07C06N01179.8°180.0°
O07C08C11C09179.6°179.4°
O07C08C11N18180.0°180.0°
C08O07C06C050.1°0.1°
O07C08C09C050.2°0.1°
O07C08C09N10179.7°180.0°
C06N01C02C030.3°0.1°
N01C06C05C09179.9°180.0°
N01C06C05C040.0°0.1°
C06N01C02H7179.7°180.0°
C02N01C06C050.1°0.1°
N01C02C03H7180.0°179.9°
N01C02C03C040.5°0.1°
N01C02C03H6179.6°179.9°
C08C11N18C190.5°0.4°
C11C08C09C05179.9°179.6°
C11C08C09N100.6°0.5°
N18C11C08C090.3°0.6°
C11N18C19N101.0°0.0°
C11N18C19C20178.4°179.7°
C06C05C09C080.1°0.0°
C06C05C09C04179.9°179.9°
C06C05C09N10179.5°179.9°
C06C05C04C030.1°0.0°
C06C05C04H5179.9°180.0°
C08C09C05N10179.4°179.9°
C08C09C05C04179.8°179.9°
C08C09N10C191.0°0.1°
C02C03C04C050.4°0.0°
C02C03C04H6180.0°179.9°
C02C03C04H5179.7°180.0°
N18C19N10C091.2°0.2°
N18C19N10C20177.4°179.7°
N18C19C20C2625.6°0.3°
N18C19C20C21157.7°179.2°
C09C05C04C03179.9°179.9°
C05C09N10C19179.7°180.0°
C09C05C04H50.0°0.2°
C04C05C09N100.4°0.2°
C05C04C03H5180.0°179.9°
C05C04C03H6179.7°179.9°
C09N10C19C20178.6°179.9°
C04C03C02H7179.5°180.0°
N10C19C20C26151.9°180.0°
N10C19C20C2124.8°0.5°
C19C20C26C21176.8°179.5°
C19C20C26C24178.7°180.0°
C19C20C21C22178.4°179.8°
C19C20C21H31.6°0.3°
C19C20C26H41.3°0.4°
C20C26C24H4180.0°179.6°
C20C26C24O25179.2°179.8°
C20C26C24C230.9°0.4°
C26C20C21C221.8°0.3°
C26C20C21H3178.2°179.8°
C24C26C20C211.9°0.5°
C26C24O25C23179.9°179.8°
C26C24C23C220.2°0.2°
C26C24O25H1180.0°90.3°
C26C24C23H2179.8°179.7°
C20C21C22H3180.0°179.9°
C20C21C22C230.7°0.0°
C20C21C22N28179.0°180.0°
C21C20C26H4178.1°180.0°
O25C24C23C22179.8°180.0°
O25C24C23H20.2°0.0°
O25C24C26H40.9°0.2°
C24C23C22C210.3°0.0°
C24C23C22H2180.0°180.0°
C24C23C22N28180.0°180.0°
C23C24O25H10.1°89.9°
C23C24C26H4179.1°180.0°
C21C22C23N28179.7°180.0°
C21C22C23H2179.7°180.0°
C21C22N28H16180.0°180.0°
C21C22N28H1760.0°0.0°
C23C22C21H3179.3°180.0°
C23C22N28H160.3°0.0°
C23C22N28H17119.7°180.0°
N28C22C23H20.0°0.0°
N28C22C21H31.0°0.1°
C22N28H16H17120.0°180.0°
H5C04C03H60.3°0.0°
H6C03C02H70.5°0.1°
H8C17C16H109.1°56.8°
H8C17C16H11110.0°176.9°
H9C17C16H10128.2°63.2°
H9C17C16H119.0°56.8°
H12C14C13H1436.5°63.3°
H12C14C13H1583.3°56.9°
H13C14C13H14156.5°56.9°
H13C14C13H1536.6°177.0°

226262

PDB entries from 2024-10-16

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