XC0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.41Å | |
O | C | doub | 1.21Å | 1.16Å | |
C | CA | sing | 1.51Å | 1.51Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CB | CG | sing | 1.53Å | 1.53Å | |
CG | CD | sing | 1.53Å | 1.52Å | |
CD | CE | sing | 1.53Å | 1.51Å | |
CE | C1 | sing | 1.53Å | 1.51Å | |
C1 | C2 | sing | 1.53Å | 1.51Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
C2 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H4 | sing | 1.09Å | 1.10Å | |
C2 | H3 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H8 | sing | 1.09Å | 1.10Å | |
CB | H9 | sing | 1.09Å | 1.10Å | |
CG | H10 | sing | 1.09Å | 1.10Å | |
CG | H11 | sing | 1.09Å | 1.10Å | |
CD | H12 | sing | 1.09Å | 1.10Å | |
CD | H13 | sing | 1.09Å | 1.10Å | |
CE | H14 | sing | 1.09Å | 1.10Å | |
CE | H15 | sing | 1.09Å | 1.10Å | |
C1 | H16 | sing | 1.09Å | 1.10Å | |
C1 | H17 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 109.2° | 109.5° |
N | CA | CB | 114.5° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 108.8° | 109.5° |
O | C | CA | 115.9° | 120.0° |
O | C | OXT | 123.9° | 120.0° |
C | CA | CB | 109.1° | 109.5° |
CA | C | OXT | 119.7° | 120.0° |
C | CA | HA | 107.6° | 109.5° |
CA | CB | CG | 115.5° | 109.5° |
CB | CA | HA | 107.4° | 109.5° |
CA | CB | H8 | 108.0° | 109.5° |
CA | CB | H9 | 108.0° | 109.5° |
CB | CG | CD | 111.1° | 109.5° |
CG | CB | H8 | 107.9° | 109.5° |
CG | CB | H9 | 107.9° | 109.5° |
CB | CG | H10 | 109.1° | 109.5° |
CB | CG | H11 | 109.1° | 109.5° |
CG | CD | CE | 106.8° | 109.4° |
CD | CG | H10 | 109.0° | 109.5° |
CD | CG | H11 | 109.1° | 109.5° |
CG | CD | H12 | 110.2° | 109.5° |
CG | CD | H13 | 110.1° | 109.5° |
CD | CE | C1 | 114.2° | 109.4° |
CE | CD | H12 | 110.1° | 109.5° |
CE | CD | H13 | 110.1° | 109.5° |
CD | CE | H14 | 108.3° | 109.5° |
CD | CE | H15 | 108.3° | 109.5° |
CE | C1 | C2 | 108.5° | 109.4° |
C1 | CE | H14 | 108.3° | 109.5° |
C1 | CE | H15 | 108.3° | 109.5° |
CE | C1 | H16 | 109.7° | 109.5° |
CE | C1 | H17 | 109.7° | 109.5° |
C1 | C2 | H1 | 109.5° | 109.5° |
C1 | C2 | H4 | 109.5° | 109.5° |
C1 | C2 | H3 | 109.5° | 109.4° |
C2 | C1 | H16 | 109.7° | 109.5° |
C2 | C1 | H17 | 109.7° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
H1 | C2 | H4 | 109.5° | 109.5° |
H1 | C2 | H3 | 109.4° | 109.5° |
H4 | C2 | H3 | 109.5° | 109.6° |
H | N | H2 | 109.5° | 111.0° |
H8 | CB | H9 | 109.5° | 109.4° |
H10 | CG | H11 | 109.4° | 109.5° |
H12 | CD | H13 | 109.5° | 109.5° |
H14 | CE | H15 | 109.5° | 109.5° |
H16 | C1 | H17 | 109.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | O | 22.2° | 20.0° |
N | CA | C | CB | 125.9° | 120.0° |
N | CA | C | HA | 117.9° | 120.0° |
N | CA | CB | HA | 120.9° | 120.0° |
N | CA | CB | CG | 71.1° | 65.0° |
N | CA | C | OXT | 165.4° | 160.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB | H8 | 168.0° | 55.1° |
N | CA | CB | H9 | 49.7° | 175.0° |
O | C | CA | OXT | 172.4° | 179.9° |
O | C | CA | CB | 103.7° | 100.0° |
O | C | CA | HA | 140.1° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | CB | HA | 116.3° | 120.0° |
C | CA | CB | CG | 51.6° | 175.0° |
C | CA | N | H | 180.0° | 60.0° |
C | CA | N | H2 | 60.0° | 176.1° |
C | CA | CB | H8 | 69.2° | 65.0° |
C | CA | CB | H9 | 172.5° | 55.0° |
CA | C | OXT | HXT | 171.8° | 180.0° |
CA | CB | CG | H8 | 120.9° | 120.0° |
CA | CB | CG | H9 | 120.9° | 120.0° |
CA | CB | CG | CD | 175.4° | 180.0° |
CB | CA | C | OXT | 68.7° | 80.0° |
CB | CA | N | H | 57.3° | 60.0° |
CB | CA | N | H2 | 177.3° | 63.9° |
CA | CB | H8 | H9 | 117.3° | 120.0° |
CA | CB | CG | H10 | 55.2° | 60.0° |
CA | CB | CG | H11 | 64.3° | 60.0° |
CB | CG | CD | H10 | 120.3° | 120.0° |
CB | CG | CD | H11 | 120.3° | 120.0° |
CB | CG | CD | CE | 174.7° | 180.0° |
CG | CB | CA | HA | 167.9° | 55.0° |
CG | CB | H8 | H9 | 117.2° | 120.0° |
CB | CG | H10 | H11 | 119.3° | 120.0° |
CB | CG | CD | H12 | 65.7° | 60.0° |
CB | CG | CD | H13 | 55.1° | 60.0° |
CG | CD | CE | H12 | 119.6° | 119.9° |
CG | CD | CE | H13 | 119.5° | 120.0° |
CG | CD | CE | C1 | 149.1° | 180.0° |
CD | CG | CB | H8 | 63.7° | 60.0° |
CD | CG | CB | H9 | 54.5° | 60.0° |
CD | CG | H10 | H11 | 119.2° | 120.0° |
CG | CD | H12 | H13 | 121.2° | 120.0° |
CG | CD | CE | H14 | 90.2° | 60.1° |
CG | CD | CE | H15 | 28.4° | 60.0° |
CD | CE | C1 | H14 | 120.7° | 120.0° |
CD | CE | C1 | H15 | 120.7° | 120.0° |
CD | CE | C1 | C2 | 179.1° | 180.0° |
CE | CD | CG | H10 | 54.4° | 60.0° |
CE | CD | CG | H11 | 65.1° | 60.0° |
CE | CD | H12 | H13 | 121.2° | 120.1° |
CD | CE | H14 | H15 | 117.9° | 120.1° |
CD | CE | C1 | H16 | 61.0° | 60.0° |
CD | CE | C1 | H17 | 59.2° | 60.0° |
CE | C1 | C2 | H16 | 119.9° | 120.0° |
CE | C1 | C2 | H17 | 119.9° | 119.9° |
CE | C1 | C2 | H1 | 180.0° | 60.1° |
CE | C1 | C2 | H4 | 60.0° | 59.9° |
CE | C1 | C2 | H3 | 60.0° | 180.0° |
C1 | CE | CD | H12 | 29.5° | 60.1° |
C1 | CE | CD | H13 | 91.4° | 60.0° |
C1 | CE | H14 | H15 | 117.8° | 120.0° |
CE | C1 | H16 | H17 | 120.4° | 120.0° |
C1 | C2 | H1 | H4 | 120.0° | 120.0° |
C1 | C2 | H1 | H3 | 120.0° | 119.9° |
C1 | C2 | H4 | H3 | 120.0° | 120.0° |
C2 | C1 | CE | H14 | 58.4° | 60.0° |
C2 | C1 | CE | H15 | 60.2° | 60.0° |
C2 | C1 | H16 | H17 | 120.4° | 120.0° |
OXT | C | CA | HA | 47.5° | 39.9° |
H1 | C2 | H4 | H3 | 120.0° | 120.0° |
H1 | C2 | C1 | H16 | 60.1° | 60.0° |
H1 | C2 | C1 | H17 | 60.1° | 180.0° |
H4 | C2 | C1 | H16 | 179.9° | 180.0° |
H4 | C2 | C1 | H17 | 59.9° | 60.0° |
H3 | C2 | C1 | H16 | 59.9° | 60.0° |
H3 | C2 | C1 | H17 | 179.9° | 60.1° |
H | N | CA | HA | 62.9° | 180.0° |
H2 | N | CA | HA | 57.1° | 56.1° |
HA | CA | CB | H8 | 47.1° | 175.1° |
HA | CA | CB | H9 | 71.2° | 65.0° |
H8 | CB | CG | H10 | 176.0° | 180.0° |
H8 | CB | CG | H11 | 56.6° | 60.0° |
H9 | CB | CG | H10 | 65.7° | 60.0° |
H9 | CB | CG | H11 | 174.8° | 180.0° |
H10 | CG | CD | H12 | 174.0° | 180.0° |
H10 | CG | CD | H13 | 65.2° | 60.0° |
H11 | CG | CD | H12 | 54.5° | 60.0° |
H11 | CG | CD | H13 | 175.4° | 180.0° |
H12 | CD | CE | H14 | 150.1° | 180.0° |
H12 | CD | CE | H15 | 91.2° | 60.0° |
H13 | CD | CE | H14 | 29.3° | 60.0° |
H13 | CD | CE | H15 | 147.9° | 180.0° |
H14 | CE | C1 | H16 | 178.3° | 60.0° |
H14 | CE | C1 | H17 | 61.5° | 180.0° |
H15 | CE | C1 | H16 | 59.7° | 180.0° |
H15 | CE | C1 | H17 | 179.9° | 60.0° |