VLT
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.47Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | C2 | sing | 1.51Å | 1.53Å | |
| CA | C3 | sing | 1.53Å | 1.56Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| C2 | C10 | doub | 1.33Å | 1.30Å | |
| C2 | H3 | sing | 1.08Å | 1.08Å | |
| C3 | C4 | sing | 1.51Å | 1.54Å | |
| C3 | H4 | sing | 1.09Å | 1.10Å | |
| C3 | H5 | sing | 1.09Å | 1.10Å | |
| C4 | C5 | doub | 1.38Å | 1.41Å | Aromatic |
| C4 | C6 | sing | 1.38Å | 1.39Å | Aromatic |
| C5 | C7 | sing | 1.38Å | 1.39Å | Aromatic |
| C5 | H6 | sing | 1.08Å | 1.08Å | |
| C6 | C8 | doub | 1.38Å | 1.40Å | Aromatic |
| C6 | H7 | sing | 1.08Å | 1.08Å | |
| C7 | C9 | doub | 1.39Å | 1.39Å | Aromatic |
| C7 | H8 | sing | 1.08Å | 1.08Å | |
| C8 | C9 | sing | 1.39Å | 1.39Å | Aromatic |
| C8 | H9 | sing | 1.08Å | 1.08Å | |
| C9 | O1 | sing | 1.36Å | 1.39Å | |
| O1 | H10 | sing | 0.97Å | 0.95Å | |
| C10 | C | sing | 1.47Å | 1.47Å | |
| C10 | H11 | sing | 1.08Å | 1.08Å | |
| C | O | doub | 1.22Å | 1.23Å | |
| C | OXT | sing | 1.35Å | 1.30Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| N | H2 | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| N | CA | C2 | 96.8° | 109.4° |
| N | CA | C3 | 109.1° | 109.5° |
| N | CA | HA | 120.6° | 109.5° |
| CA | N | H2 | 109.5° | 111.0° |
| H | N | H2 | 109.4° | 111.0° |
| C2 | CA | C3 | 117.6° | 109.5° |
| C2 | CA | HA | 112.6° | 109.5° |
| CA | C2 | C10 | 123.1° | 120.0° |
| CA | C2 | H3 | 118.4° | 120.0° |
| C3 | CA | HA | 101.1° | 109.5° |
| CA | C3 | C4 | 103.6° | 109.5° |
| CA | C3 | H4 | 111.5° | 109.5° |
| CA | C3 | H5 | 111.5° | 109.5° |
| C10 | C2 | H3 | 118.4° | 120.0° |
| C2 | C10 | C | 122.1° | 120.0° |
| C2 | C10 | H11 | 119.0° | 120.0° |
| C4 | C3 | H4 | 111.5° | 109.4° |
| C4 | C3 | H5 | 111.5° | 109.5° |
| C3 | C4 | C5 | 115.6° | 120.0° |
| C3 | C4 | C6 | 125.2° | 119.9° |
| H4 | C3 | H5 | 107.4° | 109.5° |
| C5 | C4 | C6 | 119.1° | 120.1° |
| C4 | C5 | C7 | 121.9° | 120.1° |
| C4 | C5 | H6 | 119.1° | 119.9° |
| C4 | C6 | C8 | 119.5° | 120.1° |
| C4 | C6 | H7 | 120.2° | 120.0° |
| C7 | C5 | H6 | 119.1° | 120.0° |
| C5 | C7 | C9 | 117.6° | 119.9° |
| C5 | C7 | H8 | 121.2° | 120.0° |
| C8 | C6 | H7 | 120.2° | 119.9° |
| C6 | C8 | C9 | 120.3° | 119.9° |
| C6 | C8 | H9 | 119.8° | 120.1° |
| C9 | C7 | H8 | 121.2° | 120.1° |
| C7 | C9 | C8 | 121.5° | 119.9° |
| C7 | C9 | O1 | 117.9° | 120.0° |
| C9 | C8 | H9 | 119.9° | 120.0° |
| C8 | C9 | O1 | 120.6° | 120.1° |
| C9 | O1 | H10 | 109.5° | 114.0° |
| C | C10 | H11 | 118.9° | 120.0° |
| C10 | C | O | 110.1° | 120.0° |
| C10 | C | OXT | 129.7° | 120.0° |
| O | C | OXT | 120.2° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | C2 | C3 | 115.7° | 120.0° |
| N | CA | C2 | HA | 127.3° | 120.0° |
| N | CA | C3 | HA | 128.1° | 120.0° |
| N | CA | C2 | C10 | 157.1° | 5.0° |
| N | CA | C2 | H3 | 22.9° | 175.0° |
| N | CA | C3 | C4 | 59.6° | 65.0° |
| N | CA | C3 | H4 | 60.4° | 54.9° |
| N | CA | C3 | H5 | 179.6° | 175.0° |
| H | N | CA | C2 | 180.0° | 63.9° |
| H | N | CA | C3 | 57.7° | 176.1° |
| H | N | CA | HA | 58.5° | 56.1° |
| C2 | CA | C3 | HA | 123.1° | 120.0° |
| CA | C2 | C10 | H3 | 180.0° | 180.0° |
| C2 | CA | C3 | C4 | 168.5° | 175.0° |
| C2 | CA | C3 | H4 | 48.5° | 65.0° |
| C2 | CA | C3 | H5 | 71.5° | 55.1° |
| CA | C2 | C10 | C | 178.5° | 180.0° |
| CA | C2 | C10 | H11 | 1.5° | 0.0° |
| C2 | CA | N | H2 | 60.0° | 60.0° |
| C3 | CA | C2 | C10 | 41.3° | 125.0° |
| C3 | CA | C2 | H3 | 138.7° | 55.0° |
| CA | C3 | C4 | H4 | 120.0° | 120.0° |
| CA | C3 | C4 | H5 | 120.0° | 120.0° |
| CA | C3 | H4 | H5 | 122.4° | 120.0° |
| CA | C3 | C4 | C5 | 68.3° | 90.0° |
| CA | C3 | C4 | C6 | 108.5° | 90.3° |
| C3 | CA | N | H2 | 177.7° | 59.9° |
| HA | CA | C2 | C10 | 75.7° | 115.0° |
| HA | CA | C2 | H3 | 104.3° | 65.0° |
| HA | CA | C3 | C4 | 68.5° | 55.0° |
| HA | CA | C3 | H4 | 171.5° | 174.9° |
| HA | CA | C3 | H5 | 51.5° | 65.0° |
| HA | CA | N | H2 | 61.4° | 180.0° |
| C2 | C10 | C | H11 | 180.0° | 180.0° |
| C2 | C10 | C | O | 178.8° | 0.0° |
| C2 | C10 | C | OXT | 0.4° | 180.0° |
| H3 | C2 | C10 | C | 1.5° | 0.0° |
| H3 | C2 | C10 | H11 | 178.5° | 180.0° |
| C4 | C3 | H4 | H5 | 122.4° | 120.0° |
| C3 | C4 | C5 | C6 | 177.0° | 179.8° |
| C3 | C4 | C5 | C7 | 177.8° | 180.0° |
| C3 | C4 | C5 | H6 | 2.2° | 0.1° |
| C3 | C4 | C6 | C8 | 176.3° | 180.0° |
| C3 | C4 | C6 | H7 | 3.7° | 0.0° |
| H4 | C3 | C4 | C5 | 171.7° | 30.0° |
| H4 | C3 | C4 | C6 | 11.5° | 149.8° |
| H5 | C3 | C4 | C5 | 51.7° | 150.1° |
| H5 | C3 | C4 | C6 | 131.6° | 29.7° |
| C4 | C5 | C7 | H6 | 180.0° | 179.9° |
| C5 | C4 | C6 | C8 | 0.3° | 0.2° |
| C5 | C4 | C6 | H7 | 179.7° | 179.8° |
| C4 | C5 | C7 | C9 | 1.3° | 0.1° |
| C4 | C5 | C7 | H8 | 178.7° | 180.0° |
| C6 | C4 | C5 | C7 | 0.9° | 0.2° |
| C6 | C4 | C5 | H6 | 179.2° | 179.7° |
| C4 | C6 | C8 | H7 | 180.0° | 180.0° |
| C4 | C6 | C8 | C9 | 1.0° | 0.0° |
| C4 | C6 | C8 | H9 | 179.0° | 179.9° |
| C5 | C7 | C9 | H8 | 180.0° | 179.9° |
| C5 | C7 | C9 | C8 | 0.5° | 0.3° |
| C5 | C7 | C9 | O1 | 179.4° | 179.9° |
| H6 | C5 | C7 | C9 | 178.7° | 180.0° |
| H6 | C5 | C7 | H8 | 1.3° | 0.1° |
| C6 | C8 | C9 | C7 | 0.6° | 0.2° |
| C6 | C8 | C9 | H9 | 180.0° | 179.9° |
| C6 | C8 | C9 | O1 | 179.5° | 179.9° |
| H7 | C6 | C8 | C9 | 179.0° | 180.0° |
| H7 | C6 | C8 | H9 | 1.0° | 0.1° |
| C7 | C9 | C8 | O1 | 179.9° | 179.8° |
| C7 | C9 | C8 | H9 | 179.4° | 179.7° |
| C7 | C9 | O1 | H10 | 180.0° | 90.0° |
| H8 | C7 | C9 | C8 | 179.4° | 179.8° |
| H8 | C7 | C9 | O1 | 0.6° | 0.0° |
| C8 | C9 | O1 | H10 | 0.1° | 89.8° |
| H9 | C8 | C9 | O1 | 0.5° | 0.2° |
| C10 | C | O | OXT | 179.2° | 180.0° |
| C10 | C | OXT | HXT | 179.0° | 180.0° |
| H11 | C10 | C | O | 1.2° | 180.0° |
| H11 | C10 | C | OXT | 179.7° | 0.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
