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VL6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COsing1.43Å1.42Å
OC1sing1.43Å1.43Å
C1C2sing1.53Å1.50Å
C2O1sing1.43Å1.43Å
O1C3sing1.43Å1.43Å
C3C4sing1.53Å1.50Å
C4O2sing1.43Å1.46Å
O2C5sing1.36Å1.35Å
C5Ndoub1.31Å1.31ÅAromatic
NO3sing1.21Å1.42ÅAromatic
O3C6sing1.34Å1.35ÅAromatic
C7C6doub1.35Å1.34ÅAromatic
C5C7sing1.42Å1.41ÅAromatic
C6C8sing1.51Å1.48Å
C9C8sing1.53Å1.55Å
C10C9sing1.53Å1.52Å
C11C9sing1.53Å1.52Å
C8C12sing1.51Å1.52Å
O4C12doub1.21Å1.22Å
C12N1sing1.35Å1.34Å
N1C13sing1.47Å1.46Å
C13C14sing1.55Å1.52Å
O5C14sing1.43Å1.42Å
C14C15sing1.55Å1.52Å
C15C16sing1.54Å1.54Å
N1C16sing1.47Å1.46Å
C16C17sing1.51Å1.52Å
C17O6doub1.21Å1.23Å
N2C17sing1.35Å1.33Å
C18N2sing1.47Å1.46Å
C19C18sing1.53Å1.52Å
C20C18sing1.51Å1.52Å
C20C21doub1.38Å1.39ÅAromatic
C21C22sing1.38Å1.39ÅAromatic
C22C23doub1.40Å1.39ÅAromatic
C23C24sing1.40Å1.39ÅAromatic
C24C25doub1.38Å1.38ÅAromatic
C25C20sing1.38Å1.39ÅAromatic
C26C23sing1.48Å1.48Å
C26C27doub1.35Å1.37ÅAromatic
C28C27sing1.51Å1.49Å
C27N3sing1.31Å1.38ÅAromatic
N3C29doub1.29Å1.30ÅAromatic
C29Ssing1.71Å1.72ÅAromatic
SC26sing1.76Å1.74ÅAromatic
C4H13sing1.09Å1.10Å
C4H14sing1.09Å1.10Å
C14H1sing1.09Å1.10Å
C11H22sing1.09Å1.10Å
C11H20sing1.09Å1.10Å
C11H21sing1.09Å1.10Å
C7H15sing1.08Å1.08Å
C8Hsing1.09Å1.10Å
C9H16sing1.09Å1.10Å
C10H17sing1.09Å1.10Å
C10H19sing1.09Å1.10Å
C10H18sing1.09Å1.10Å
C13H23sing1.09Å1.10Å
C13H24sing1.09Å1.10Å
N2H28sing0.97Å1.00Å
C3H11sing1.09Å1.10Å
C3H12sing1.09Å1.10Å
C18H3sing1.09Å1.10Å
C25H35sing1.08Å1.08Å
C24H34sing1.08Å1.08Å
C29H39sing1.08Å1.08Å
C28H37sing1.09Å1.10Å
C28H36sing1.09Å1.10Å
C28H38sing1.09Å1.10Å
C22H33sing1.08Å1.08Å
C21H32sing1.08Å1.08Å
C19H30sing1.09Å1.10Å
C19H31sing1.09Å1.10Å
C19H29sing1.09Å1.10Å
C16H2sing1.09Å1.10Å
C15H26sing1.09Å1.10Å
C15H27sing1.09Å1.10Å
O5H25sing0.97Å0.95Å
C2H9sing1.09Å1.10Å
C2H10sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
CH6sing1.09Å1.10Å
CH5sing1.09Å1.10Å
CH4sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
COC1113.6°114.0°
OCH6109.5°109.5°
OCH5109.4°109.5°
OCH4109.5°109.5°
OC1C2113.1°109.4°
OC1H7108.5°109.5°
OC1H8108.6°109.5°
C1C2O1111.2°109.5°
C1C2H9109.0°109.5°
C1C2H10109.0°109.4°
C2C1H7108.6°109.5°
C2C1H8108.5°109.5°
C2O1C3113.1°114.0°
O1C2H9109.0°109.5°
O1C2H10109.1°109.5°
O1C3C4111.0°109.5°
O1C3H11109.1°109.5°
O1C3H12109.1°109.4°
C3C4O2109.4°109.5°
C3C4H13109.5°109.5°
C3C4H14109.5°109.5°
C4C3H11109.1°109.5°
C4C3H12109.1°109.5°
C4O2C5119.4°117.0°
O2C4H13109.5°109.5°
O2C4H14109.5°109.5°
O2C5N126.0°126.8°
O2C5C7122.4°126.9°
C5NO3104.9°111.5°
NC5C7111.6°106.3°
NO3C6108.3°111.7°
O3C6C7109.7°106.6°
O3C6C8117.4°126.7°
C6C7C5105.5°104.0°
C7C6C8132.8°126.7°
C6C7H15127.2°128.0°
C5C7H15127.3°128.0°
C6C8C9105.1°109.5°
C6C8C12111.0°109.5°
C6C8H110.8°109.4°
C8C9C10110.9°109.5°
C8C9C11115.2°109.5°
C9C8C12109.7°109.5°
C9C8H109.9°109.5°
C8C9H16106.4°109.5°
C10C9C11110.5°109.5°
C10C9H16106.7°109.5°
C9C10H17109.5°109.5°
C9C10H19109.5°109.5°
C9C10H18109.4°109.5°
C9C11H22109.5°109.5°
C9C11H20109.5°109.5°
C9C11H21109.5°109.5°
C11C9H16106.7°109.5°
C8C12O4119.2°120.0°
C8C12N1119.3°120.0°
C12C8H110.3°109.4°
O4C12N1121.5°120.0°
C12N1C13128.0°125.7°
C12N1C16120.0°125.7°
N1C13C14102.0°104.9°
C13N1C16111.9°108.7°
N1C13H23111.3°110.3°
N1C13H24111.3°110.5°
C13C14O5110.2°111.0°
C13C14C15103.2°101.6°
C13C14H1110.9°111.0°
C14C13H23111.3°110.4°
C14C13H24111.3°110.4°
O5C14C15109.0°111.0°
O5C14H1112.3°110.8°
C14O5H25109.5°114.0°
C14C15C16104.7°102.9°
C15C14H1110.9°111.1°
C14C15H26110.6°110.7°
C14C15H27110.6°110.7°
C15C16N1103.6°107.3°
C15C16C17109.7°109.9°
C15C16H2110.2°110.0°
C16C15H26110.6°110.7°
C16C15H27110.7°110.7°
N1C16C17111.5°109.8°
N1C16H2111.3°109.9°
C16C17O6121.1°120.0°
C16C17N2115.5°120.0°
C17C16H2110.4°109.8°
O6C17N2123.4°120.0°
C17N2C18123.0°120.0°
C17N2H28118.5°120.0°
N2C18C19108.9°109.4°
N2C18C20109.2°109.4°
C18N2H28118.5°120.0°
N2C18H3109.4°109.5°
C19C18C20111.9°109.5°
C19C18H3108.6°109.5°
C18C19H30109.5°109.4°
C18C19H31109.5°109.5°
C18C19H29109.5°109.5°
C18C20C21121.3°119.8°
C18C20C25120.4°119.9°
C20C18H3108.7°109.5°
C20C21C22121.0°120.1°
C21C20C25118.2°120.2°
C20C21H32119.5°119.9°
C21C22C23120.6°119.9°
C21C22H33119.7°120.1°
C22C21H32119.5°120.0°
C22C23C24118.4°119.7°
C22C23C26120.8°120.1°
C23C22H33119.7°120.1°
C23C24C25120.7°119.9°
C24C23C26120.8°120.2°
C23C24H34119.7°120.0°
C24C25C20121.1°120.2°
C24C25H35119.5°120.0°
C25C24H34119.7°120.1°
C20C25H35119.4°119.8°
C23C26C27131.0°126.1°
C23C26S119.4°126.1°
C26C27C28126.9°122.9°
C26C27N3114.9°114.2°
C27C26S109.6°107.8°
C28C27N3118.2°122.8°
C27C28H37109.5°109.5°
C27C28H36109.4°109.6°
C27C28H38109.4°109.5°
C27N3C29110.8°117.2°
N3C29S116.0°110.4°
N3C29H39122.0°124.8°
C29SC2688.7°90.3°
SC29H39122.0°124.8°
H13C4H14109.5°109.5°
H22C11H20109.4°109.5°
H22C11H21109.5°109.4°
H20C11H21109.5°109.5°
H17C10H19109.5°109.5°
H17C10H18109.5°109.4°
H19C10H18109.5°109.5°
H23C13H24109.5°110.3°
H11C3H12109.5°109.4°
H37C28H36109.5°109.5°
H37C28H38109.5°109.4°
H36C28H38109.5°109.4°
H30C19H31109.4°109.4°
H30C19H29109.5°109.5°
H31C19H29109.4°109.5°
H26C15H27109.5°110.8°
H9C2H10109.5°109.6°
H7C1H8109.5°109.5°
H6CH5109.5°109.4°
H6CH4109.5°109.5°
H5CH4109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
COC1C2178.0°180.0°
COC1H757.4°60.0°
COC1H861.5°60.0°
OCH6H5120.0°120.0°
OCH6H4120.0°120.1°
OCH5H4120.0°120.0°
OC1C2H7120.5°120.0°
OC1C2H8120.6°120.0°
OC1C2O160.4°65.0°
OC1C2H959.8°55.0°
OC1C2H10179.3°175.0°
OC1H7H8118.3°120.0°
C1OCH6180.0°59.9°
C1OCH560.0°60.0°
C1OCH460.0°180.0°
C1C2O1H9120.2°120.0°
C1C2O1H10120.2°119.9°
C1C2O1C3157.1°180.0°
C1C2H9H10119.2°120.0°
C2C1H7H8118.3°120.0°
C2O1C3C4117.9°180.0°
C2O1C3H11121.9°59.9°
C2O1C3H122.3°60.0°
O1C2H9H10119.2°120.0°
O1C2C1H7179.1°175.0°
O1C2C1H860.1°55.0°
O1C3C4H11120.2°120.0°
O1C3C4H12120.2°120.0°
O1C3C4O285.7°65.0°
O1C3C4H1334.3°175.0°
O1C3C4H14154.3°55.0°
O1C3H11H12119.3°119.9°
C3O1C2H936.8°60.0°
C3O1C2H1082.7°60.1°
C3C4O2H13120.0°120.0°
C3C4O2H14120.0°120.0°
C3C4O2C5155.6°180.0°
C3C4H13H14120.0°120.0°
C4C3H11H12119.3°120.0°
C4O2C5N0.9°0.1°
C4O2C5C7179.0°179.7°
O2C4H13H14120.0°120.0°
O2C4C3H11154.1°175.0°
O2C4C3H1234.5°55.0°
O2C5NC7180.0°179.7°
O2C5NO3180.0°179.7°
O2C5C7C6179.2°179.7°
C5O2C4H1335.6°60.0°
C5O2C4H1484.4°60.0°
O2C5C7H150.8°0.2°
C5NO3C60.8°0.0°
NC5C7C60.7°0.0°
NC5C7H15179.3°180.0°
NO3C6C71.3°0.0°
O3NC5C70.0°0.0°
NO3C6C8179.0°180.0°
O3C6C7C8177.3°180.0°
O3C6C7C51.2°0.0°
O3C6C8C9127.3°60.0°
O3C6C8C12114.1°60.0°
O3C6C7H15178.7°180.0°
O3C6C8H8.7°180.0°
C6C7C5H15180.0°180.0°
C7C6C8C955.6°120.0°
C7C6C8C1263.0°120.0°
C7C6C8H174.2°0.0°
C5C7C6C8178.5°180.0°
C6C8C9C12119.4°120.0°
C6C8C9H119.2°120.0°
C6C8C9C10176.6°175.0°
C6C8C9C1156.9°55.0°
C6C8C12H123.1°120.0°
C6C8C12O449.3°92.9°
C6C8C12N1130.9°87.1°
C8C6C7H151.5°0.0°
C6C8C9H1661.0°65.0°
C8C9C10C11129.0°120.0°
C8C9C10H16115.4°120.0°
C8C9C11H16117.8°120.0°
C9C8C12H121.2°120.0°
C9C8C12O466.5°27.1°
C9C8C12N1113.3°152.9°
C8C9C11H22180.0°60.0°
C8C9C11H2060.0°180.0°
C8C9C11H2160.0°60.0°
C8C9C10H17180.0°175.3°
C8C9C10H1960.0°55.3°
C8C9C10H1860.0°64.7°
C10C9C11H16115.6°120.0°
C10C9C8C1257.2°65.0°
C10C9C11H2253.3°180.0°
C10C9C11H2066.7°60.0°
C10C9C11H21173.3°60.0°
C10C9C8H64.2°55.0°
C9C10H17H19120.0°120.0°
C9C10H17H18120.0°120.0°
C9C10H19H18120.0°120.0°
C11C9C8C12176.3°175.0°
C9C11H22H20120.0°120.0°
C9C11H22H21120.0°120.0°
C9C11H20H21120.0°120.0°
C11C9C8H62.3°65.0°
C11C9C10H1751.0°64.7°
C11C9C10H19171.0°175.3°
C11C9C10H1869.0°55.3°
C8C12O4N1179.8°180.0°
C8C12N1C134.5°5.0°
C8C12N1C16175.2°175.0°
C12C8C9H1658.4°55.0°
O4C12N1C13175.3°175.0°
O4C12N1C165.0°5.0°
O4C12C8H172.4°147.1°
C12N1C13C16179.7°180.0°
C12N1C13C14152.3°155.9°
C12N1C16C15173.7°179.0°
C12N1C16C1768.4°61.6°
N1C12C8H7.8°32.9°
C12N1C13H2333.5°85.2°
C12N1C13H2488.9°37.0°
C12N1C16H255.3°59.4°
N1C13C14H23118.8°118.8°
N1C13C14H24118.8°119.0°
N1C13C14O578.9°81.1°
N1C13C14C1537.4°37.0°
C13N1C16C156.1°1.0°
C13N1C16C17111.9°118.4°
N1C13C14H1156.1°155.1°
N1C13H23H24123.5°122.3°
C13N1C16H2124.5°120.6°
C13C14O5C15112.5°112.2°
C13C14O5H1124.2°123.9°
C13C14C15H1118.8°118.1°
C13C14C15C1634.6°35.5°
C14C13N1C1627.5°24.1°
C14C13H23H24123.4°122.2°
C13C14C15H26153.8°153.9°
C13C14C15H2784.7°82.9°
C13C14O5H25180.0°67.8°
O5C14C15H1124.2°123.7°
O5C14C15C1682.5°82.6°
O5C14C13H2339.9°160.1°
O5C14C13H24162.3°37.9°
O5C14C15H2636.7°35.7°
O5C14C15H27158.3°159.0°
C14C15C16H26119.2°118.4°
C14C15C16H27119.2°118.3°
C14C15C16N118.0°22.2°
C14C15C16C17137.2°141.6°
C15C14C13H23156.2°81.9°
C15C14C13H2481.4°155.9°
C14C15C16H2101.1°97.4°
C14C15H26H27122.2°123.2°
C15C14O5H2567.5°180.0°
C15C16N1C17117.9°119.4°
C15C16N1H2118.4°119.6°
C15C16C17H2121.6°121.1°
C15C16C17O681.0°117.8°
C15C16C17N2100.6°62.1°
C16C15C14H1153.4°153.6°
C16C15H26H27122.3°123.3°
N1C16C17H2124.2°121.0°
N1C16C17O633.2°0.1°
N1C16C17N2145.2°180.0°
C16N1C13H23146.3°94.8°
C16N1C13H2491.3°143.0°
N1C16C15H26137.3°140.6°
N1C16C15H27101.2°96.1°
C16C17O6N2178.3°179.9°
C16C17N2C18177.4°180.0°
C16C17N2H282.6°0.0°
C17C16C15H26103.6°100.0°
C17C16C15H2718.0°23.3°
O6C17N2C184.2°0.0°
O6C17N2H28175.8°180.0°
O6C17C16H2157.4°121.1°
C17N2C18H28180.0°180.0°
C17N2C18C19150.7°85.0°
C17N2C18C2086.8°155.0°
C17N2C18H332.1°35.0°
N2C17C16H221.1°59.0°
N2C18C19C20120.9°120.0°
N2C18C19H3119.1°120.0°
N2C18C20H3119.3°120.0°
N2C18C20C21137.0°140.0°
N2C18C20C2538.9°39.7°
N2C18C19H30180.0°60.0°
N2C18C19H3160.0°180.0°
N2C18C19H2960.0°60.0°
C19C18C20H3120.0°120.0°
C19C18C20C21102.3°100.0°
C19C18C20C2581.8°80.3°
C19C18N2H2829.3°95.0°
C18C19H30H31120.0°120.0°
C18C19H30H29120.0°120.0°
C18C19H31H29120.0°120.0°
C18C20C21C25176.0°179.7°
C18C20C21C22178.7°179.7°
C18C20C25C24178.4°180.0°
C20C18N2H2893.2°25.0°
C18C20C25H351.6°0.0°
C18C20C21H321.3°0.0°
C20C18C19H3059.1°59.9°
C20C18C19H31179.1°60.0°
C20C18C19H2960.9°180.0°
C20C21C22H32180.0°179.8°
C20C21C22C231.2°0.5°
C21C20C25C242.4°0.3°
C21C20C18H317.7°20.0°
C21C20C25H35177.6°179.7°
C20C21C22H33178.8°179.7°
C21C22C23H33180.0°179.7°
C21C22C23C240.6°0.3°
C22C21C20C252.7°0.5°
C21C22C23C26179.2°179.7°
C22C23C24C26178.6°180.0°
C22C23C24C251.0°0.0°
C22C23C26C2758.6°48.1°
C22C23C26S120.7°131.9°
C22C23C24H34179.0°180.0°
C23C22C21H32178.8°179.7°
C23C24C25H34180.0°180.0°
C23C24C25C200.6°0.1°
C24C23C26C27122.9°131.9°
C24C23C26S57.8°48.1°
C23C24C25H35179.4°180.0°
C24C23C22H33179.4°180.0°
C24C25C20H35180.0°180.0°
C25C24C23C26179.6°180.0°
C25C20C18H3158.2°159.7°
C20C25C24H34179.4°180.0°
C25C20C21H32177.3°179.7°
C23C26C27S179.4°180.0°
C23C26C27C281.1°0.0°
C23C26C27N3179.7°180.0°
C23C26SC29179.7°180.0°
C26C23C24H340.4°0.0°
C26C23C22H330.8°0.0°
C26C27C28N3178.6°180.0°
C26C27N3C291.3°0.0°
C27C26SC290.3°0.0°
C26C27C28H37178.6°94.1°
C26C27C28H3661.4°145.8°
C26C27C28H3858.6°25.8°
C28C27N3C29179.9°180.0°
C28C27C26S179.6°180.0°
C27C28H37H36120.0°120.1°
C27C28H37H38120.0°120.0°
C27C28H36H38120.0°120.0°
C27N3C29S1.1°0.0°
N3C27C26S0.9°0.0°
C27N3C29H39178.9°180.0°
N3C27C28H370.0°85.9°
N3C27C28H36120.0°34.1°
N3C27C28H38120.0°154.2°
N3C29SH39180.0°180.0°
N3C29SC260.5°0.0°
C26SC29H39179.5°180.0°
H13C4C3H1185.9°55.0°
H13C4C3H12154.5°65.0°
H14C4C3H1134.1°65.0°
H14C4C3H1285.5°175.0°
H1C14C13H2385.1°36.3°
H1C14C13H2437.3°85.9°
H1C14C15H2687.4°88.0°
H1C14C15H2734.1°35.3°
H1C14O5H2555.8°56.1°
H22C11H20H21120.0°120.0°
H22C11C9H1662.2°60.0°
H20C11C9H16177.8°60.0°
H21C11C9H1657.7°180.0°
HC8C9H16179.7°175.0°
H16C9C10H1764.6°55.3°
H16C9C10H1955.4°64.7°
H16C9C10H18175.4°175.3°
H17C10H19H18120.0°120.0°
H28N2C18H3147.9°145.0°
H3C18C19H3060.9°180.0°
H3C18C19H3159.1°60.1°
H3C18C19H29179.1°60.0°
H35C25C24H340.6°0.0°
H37C28H36H38120.0°119.9°
H33C22C21H321.2°0.0°
H30C19H31H29120.0°120.1°
H2C16C15H2618.1°21.0°
H2C16C15H27139.7°144.3°
H9C2C1H760.7°65.0°
H9C2C1H8179.6°174.9°
H10C2C1H758.8°55.0°
H10C2C1H860.1°65.0°
H6CH5H4120.0°120.0°

221051

PDB entries from 2024-06-12

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