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VJ6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C28O8sing1.43Å1.39Å
O8C18sing1.36Å1.37Å
C19C18doub1.39Å1.48ÅAromatic
C19C20sing1.39Å1.35ÅAromatic
C18C17sing1.39Å1.36ÅAromatic
N1C20sing1.40Å1.42Å
N1C1sing1.33Å1.42Å
C20C21doub1.39Å1.49ÅAromatic
C17C16doub1.38Å1.49ÅAromatic
O1C1doub1.22Å1.22Å
C21C16sing1.38Å1.36ÅAromatic
C16C15sing1.51Å1.49Å
C1C2sing1.46Å1.50Å
C15O9sing1.43Å1.39Å
C2C22sing1.51Å1.49Å
C2C3doub1.33Å1.40Å
O9C13sing1.43Å1.38Å
C25C8sing1.51Å1.51Å
C13C12sing1.53Å1.50Å
C3C4sing1.51Å1.51Å
O5C14sing1.43Å1.40Å
O5C11sing1.43Å1.38Å
C10C26sing1.53Å1.49Å
C10C11sing1.53Å1.51Å
C10C9sing1.51Å1.50Å
O7C23doub1.21Å1.23Å
C8C9doub1.31Å1.39Å
C8C7sing1.51Å1.50Å
C4C5sing1.53Å1.51Å
C12C11sing1.53Å1.51Å
C12O6sing1.43Å1.37Å
C6C5sing1.53Å1.49Å
C6C7sing1.53Å1.49Å
C6O2sing1.45Å1.39Å
O6C27sing1.43Å1.38Å
O3C7sing1.45Å1.37Å
O3C24sing1.35Å1.38Å
C23O2sing1.35Å1.38Å
C23N3sing1.35Å1.43Å
C24N2sing1.35Å1.43Å
C24O4doub1.21Å1.22Å
N1H1sing0.97Å1.00Å
N2H2sing0.97Å1.00Å
N2H3sing0.97Å1.00Å
C3H4sing1.08Å1.08Å
N3H5sing0.97Å1.00Å
N3H6sing0.97Å1.00Å
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C5H9sing1.09Å1.10Å
C5H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
C7H12sing1.09Å1.10Å
C9H13sing1.08Å1.08Å
C10H14sing1.09Å1.10Å
C11H15sing1.09Å1.10Å
C12H16sing1.09Å1.10Å
C13H17sing1.09Å1.10Å
C13H18sing1.09Å1.10Å
C14H19sing1.09Å1.10Å
C14H20sing1.09Å1.10Å
C14H21sing1.09Å1.10Å
C15H22sing1.09Å1.10Å
C15H23sing1.09Å1.10Å
C17H24sing1.08Å1.08Å
C19H25sing1.08Å1.08Å
C21H26sing1.08Å1.08Å
C22H27sing1.09Å1.10Å
C22H28sing1.09Å1.10Å
C22H29sing1.09Å1.10Å
C25H30sing1.09Å1.10Å
C25H31sing1.09Å1.10Å
C25H32sing1.09Å1.10Å
C26H33sing1.09Å1.10Å
C26H34sing1.09Å1.10Å
C26H35sing1.09Å1.10Å
C27H36sing1.09Å1.10Å
C27H37sing1.09Å1.10Å
C27H38sing1.09Å1.10Å
C28H39sing1.09Å1.10Å
C28H40sing1.09Å1.10Å
C28H41sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C28O8C18112.9°117.0°
O8C28H39109.5°109.5°
O8C28H40109.5°109.4°
O8C28H41109.5°109.5°
O8C18C19116.7°120.0°
O8C18C17122.2°120.0°
C18C19C20119.7°119.9°
C19C18C17121.1°120.0°
C18C19H25120.1°120.0°
C19C20N1118.0°121.5°
C19C20C21120.2°119.8°
C20C19H25120.2°120.0°
C18C17C16119.1°119.9°
C18C17H24120.4°120.1°
C20N1C1127.2°120.2°
N1C20C21121.8°118.7°
C20N1H1116.4°119.9°
N1C1O1115.8°117.5°
N1C1C2123.1°125.0°
C1N1H1116.4°119.9°
C20C21C16119.7°120.0°
C20C21H26120.1°120.0°
C17C16C21120.2°120.3°
C17C16C15120.1°120.7°
C16C17H24120.4°120.0°
O1C1C2121.0°117.5°
C21C16C15119.7°119.0°
C16C21H26120.1°120.0°
C16C15O9110.2°108.7°
C16C15H22109.3°109.6°
C16C15H23109.3°109.8°
C1C2C22118.2°120.4°
C1C2C3121.7°119.7°
C15O9C13117.7°114.4°
O9C15H22109.3°109.6°
O9C15H23109.3°109.5°
C22C2C3120.1°119.9°
C2C22H27109.5°109.4°
C2C22H28109.5°109.5°
C2C22H29109.5°109.5°
C2C3C4122.7°120.4°
C2C3H4118.7°119.6°
O9C13C12111.6°109.2°
O9C13H17109.0°109.5°
O9C13H18108.9°109.5°
C25C8C9124.7°120.0°
C25C8C7119.1°120.1°
C8C25H30109.5°109.4°
C8C25H31109.5°109.5°
C8C25H32109.5°109.4°
C13C12C11108.3°109.7°
C13C12O6108.1°109.4°
C13C12H16108.7°109.4°
C12C13H17108.9°109.5°
C12C13H18109.0°109.5°
C3C4C5109.9°109.1°
C4C3H4118.6°119.9°
C3C4H7109.4°109.5°
C3C4H8109.4°109.5°
C14O5C11120.6°114.0°
O5C14H19109.5°109.4°
O5C14H20109.4°109.5°
O5C14H21109.5°109.5°
O5C11C10109.7°109.5°
O5C11C12108.8°109.5°
O5C11H15110.0°109.5°
C26C10C11109.4°109.5°
C26C10C9108.3°109.5°
C26C10H14109.7°109.5°
C10C26H33109.5°109.5°
C10C26H34109.5°109.5°
C10C26H35109.5°109.5°
C11C10C9110.7°109.4°
C10C11C12112.0°109.6°
C11C10H14109.3°109.5°
C10C11H15108.2°109.4°
C10C9C8124.8°119.9°
C10C9H13117.6°120.1°
C9C10H14109.4°109.5°
O7C23O2118.3°120.0°
O7C23N3117.1°120.0°
C9C8C7116.1°120.0°
C8C9H13117.6°120.0°
C8C7C6112.1°109.5°
C8C7O3108.5°109.4°
C8C7H12108.7°109.5°
C4C5C6110.8°109.6°
C5C4H7109.3°109.6°
C5C4H8109.3°109.6°
C4C5H9109.1°109.4°
C4C5H10109.1°109.4°
C11C12O6112.6°109.4°
C12C11H15108.1°109.4°
C11C12H16108.5°109.4°
C12O6C27119.5°114.0°
O6C12H16110.6°109.4°
C5C6C7111.5°109.5°
C5C6O2111.6°109.4°
C6C5H9109.1°109.5°
C6C5H10109.1°109.5°
C5C6H11108.5°109.4°
C7C6O2106.7°109.5°
C6C7O3108.1°109.4°
C7C6H11108.5°109.5°
C6C7H12108.8°109.5°
C6O2C23123.4°117.0°
O2C6H11110.0°109.5°
O6C27H36109.5°109.5°
O6C27H37109.5°109.5°
O6C27H38109.5°109.5°
C7O3C24119.5°117.0°
O3C7H12110.5°109.4°
O3C24N2118.2°120.0°
O3C24O4121.3°120.0°
O2C23N3117.6°120.0°
C23N3H5120.0°120.0°
C23N3H6120.0°120.0°
N2C24O4120.4°120.0°
C24N2H2120.0°120.0°
C24N2H3120.0°120.0°
H2N2H3120.0°120.0°
H5N3H6120.0°120.0°
H7C4H8109.5°109.5°
H9C5H10109.5°109.5°
H17C13H18109.4°109.6°
H19C14H20109.5°109.5°
H19C14H21109.4°109.5°
H20C14H21109.5°109.4°
H22C15H23109.5°109.6°
H27C22H28109.4°109.4°
H27C22H29109.5°109.5°
H28C22H29109.4°109.5°
H30C25H31109.5°109.5°
H30C25H32109.4°109.5°
H31C25H32109.5°109.5°
H33C26H34109.5°109.5°
H33C26H35109.4°109.4°
H34C26H35109.5°109.4°
H36C27H37109.4°109.5°
H36C27H38109.5°109.4°
H37C27H38109.5°109.5°
H39C28H40109.5°109.4°
H39C28H41109.5°109.5°
H40C28H41109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C28O8C18C1938.8°0.0°
C28O8C18C17139.6°180.0°
O8C28H39H40120.0°120.0°
O8C28H39H41120.0°120.1°
O8C28H40H41120.0°120.0°
O8C18C19C17178.4°179.9°
O8C18C19C20179.9°179.0°
O8C18C17C16179.5°179.8°
O8C18C17H240.5°0.2°
O8C18C19H250.1°1.0°
C18O8C28H39180.0°179.9°
C18O8C28H4060.0°60.0°
C18O8C28H4160.0°60.0°
C18C19C20H25180.0°179.9°
C18C19C20N1178.7°179.7°
C18C19C20C211.9°1.1°
C19C18C17C161.2°0.2°
C19C18C17H24178.9°179.9°
C20C19C18C171.6°1.0°
C19C20N1C21176.7°178.7°
C19C20N1C1138.1°164.9°
C19C20C21C161.9°0.3°
C19C20N1H141.9°15.2°
C19C20C21H26178.1°179.7°
C18C17C16H24180.0°179.9°
C18C17C16C211.1°0.5°
C18C17C16C15179.2°179.2°
C17C18C19H25178.4°179.1°
C20N1C1H1180.0°179.9°
C20N1C1O1178.5°47.0°
N1C20C21C16178.5°179.0°
C20N1C1C22.0°133.4°
N1C20C19H251.4°0.3°
N1C20C21H261.5°1.0°
C1N1C20C2145.2°16.5°
N1C1O1C2179.4°179.6°
N1C1C2C22124.8°2.7°
N1C1C2C357.4°177.3°
C20C21C16C171.4°0.5°
C20C21C16H26180.0°180.0°
C20C21C16C15178.9°179.2°
C21C20N1H1134.8°163.5°
C21C20C19H25178.1°179.0°
C17C16C21C15179.7°179.7°
C17C16C15O983.3°165.4°
C17C16C15H2236.8°74.8°
C17C16C15H23156.6°45.7°
C17C16C21H26178.6°179.5°
O1C1C2C2255.9°177.7°
O1C1C2C3122.0°2.3°
O1C1N1H11.4°133.1°
C21C16C15O997.0°14.3°
C21C16C15H22142.9°105.5°
C21C16C15H2323.1°134.1°
C21C16C17H24178.9°179.4°
C16C15O9H22120.1°119.8°
C16C15O9H23120.1°120.0°
C16C15O9C1379.8°168.4°
C16C15H22H23119.7°120.6°
C15C16C17H240.8°0.9°
C15C16C21H261.0°0.8°
C1C2C22C3177.9°180.0°
C1C2C3C4177.6°178.7°
C2C1N1H1178.0°46.6°
C1C2C3H42.4°2.2°
C1C2C22H27180.0°0.0°
C1C2C22H2860.0°119.9°
C1C2C22H2960.0°120.0°
C15O9C13C12178.0°154.7°
C15O9C13H1761.7°34.8°
C15O9C13H1857.7°85.4°
O9C15H22H23119.7°120.2°
C22C2C3C40.2°1.3°
C22C2C3H4179.8°177.8°
C2C22H27H28120.0°120.0°
C2C22H27H29120.0°120.0°
C2C22H28H29120.0°120.1°
C2C3C4H4180.0°179.1°
C2C3C4C5156.3°146.8°
C2C3C4H736.3°93.3°
C2C3C4H883.6°26.8°
C3C2C22H272.1°180.0°
C3C2C22H28122.1°60.1°
C3C2C22H29117.9°59.9°
O9C13C12H17120.3°119.9°
O9C13C12H18120.3°119.9°
O9C13C12C11168.5°129.8°
O9C13C12O669.2°9.7°
O9C13C12H1650.8°110.2°
O9C13H17H18119.0°120.1°
C13O9C15H2240.3°71.9°
C13O9C15H23160.0°48.4°
C25C8C9C103.0°0.9°
C25C8C9C7177.3°179.6°
C25C8C7C664.2°56.5°
C25C8C7O355.1°63.5°
C25C8C7H12175.4°176.6°
C25C8C9H13176.9°179.6°
C8C25H30H31120.0°120.0°
C8C25H30H32120.0°119.9°
C8C25H31H32120.0°120.0°
C13C12C11O550.2°69.1°
C13C12C11C1071.2°170.8°
C13C12C11O6119.4°120.1°
C13C12C11H16117.8°120.0°
C13C12O6H16118.9°119.9°
C13C12O6C27178.9°89.8°
C13C12C11H15169.7°50.8°
C12C13H17H18119.0°120.1°
C3C4C5H7120.1°119.8°
C3C4C5H8120.1°119.9°
C3C4C5C663.0°89.6°
C3C4H7H8119.8°120.1°
C3C4C5H957.2°30.4°
C3C4C5H10176.8°150.4°
C14O5C11C10139.6°122.5°
C14O5C11C1297.6°117.3°
C14O5C11H1520.7°2.6°
O5C14H19H20120.0°120.0°
O5C14H19H21120.0°120.0°
O5C14H20H21120.0°120.0°
O5C11C10C2667.4°30.0°
O5C11C10C12120.9°120.1°
O5C11C10H15120.0°119.9°
O5C11C10C9173.3°150.0°
O5C11C12H15119.4°119.9°
O5C11C12O669.2°170.8°
O5C11C10H1452.7°90.0°
O5C11C12H16168.0°51.0°
C11O5C14H19180.0°57.8°
C11O5C14H2060.0°62.2°
C11O5C14H2160.0°177.9°
C26C10C11C9119.2°120.0°
C26C10C11H14120.1°120.0°
C26C10C9H14119.5°120.0°
C26C10C9C8101.8°101.4°
C26C10C11C12171.6°150.1°
C26C10C9H1378.3°79.2°
C26C10C11H1552.6°89.9°
C10C26H33H34120.0°120.1°
C10C26H33H35120.0°120.0°
C10C26H34H35120.0°120.0°
C11C10C9H14120.6°120.0°
C11C10C9C8138.3°138.7°
C10C11C12H15119.1°120.0°
C10C11C12O6169.3°50.7°
C11C10C9H1341.6°40.8°
C10C11C12H1646.6°69.1°
C11C10C26H33180.0°60.0°
C11C10C26H3460.0°179.9°
C11C10C26H3560.0°60.0°
C10C9C8H13180.0°179.5°
C10C9C8C7174.3°178.7°
C9C10C11C1252.4°89.9°
C9C10C11H1566.7°30.1°
C9C10C26H3359.2°60.0°
C9C10C26H34179.3°60.1°
C9C10C26H3560.7°179.9°
O7C23O2C616.2°0.0°
O7C23O2N3150.0°180.0°
O7C23N3H50.0°0.0°
O7C23N3H6180.0°180.0°
C9C8C7C6118.3°123.1°
C9C8C7O3122.3°116.9°
C9C8C7H122.1°3.0°
C8C9C10H1417.7°18.6°
C9C8C25H30180.0°56.8°
C9C8C25H3160.0°176.9°
C9C8C25H3260.0°63.1°
C8C7C6C558.6°151.6°
C8C7C6O3119.6°120.0°
C8C7C6H12120.3°120.1°
C8C7C6O2179.2°88.4°
C8C7O3H12119.2°119.9°
C8C7O3C2488.5°89.9°
C8C7C6H1160.8°31.6°
C7C8C9H135.7°0.8°
C7C8C25H302.8°123.6°
C7C8C25H31122.8°3.5°
C7C8C25H32117.2°116.5°
C4C5C6H9120.2°120.0°
C4C5C6H10120.2°120.0°
C4C5C6C7176.8°156.5°
C4C5C6O263.9°83.4°
C5C4C3H423.7°34.2°
C5C4H7H8119.8°120.2°
C4C5H9H10119.4°119.9°
C4C5C6H1157.4°36.5°
C11C12O6H16121.6°119.8°
C11C12O6C2761.6°150.0°
C12C11C10H1468.2°30.1°
C11C12C13H1748.2°110.4°
C11C12C13H1871.1°9.8°
O6C12C11H1550.2°69.3°
O6C12C13H17170.5°129.5°
O6C12C13H1851.1°110.3°
C12O6C27H36180.0°180.0°
C12O6C27H3760.0°60.0°
C12O6C27H3860.0°60.0°
C5C6C7O2122.1°120.0°
C5C6C7H11119.4°120.0°
C5C6O2H11120.5°119.9°
C5C6C7O3178.2°88.4°
C5C6O2C23139.7°90.0°
C6C5C4H7177.0°150.5°
C6C5C4H857.1°30.3°
C6C5H9H10119.4°120.0°
C5C6C7H1261.7°31.6°
C7C6O2H11117.5°120.0°
C6C7O3H12119.0°120.0°
C6C7O3C24149.7°150.0°
C7C6O2C2398.3°149.9°
C7C6C5H956.7°36.5°
C7C6C5H1063.0°83.5°
O2C6C7O359.6°31.6°
C6O2C23N3133.7°180.0°
O2C6C5H9175.9°156.6°
O2C6C5H1056.3°36.6°
O2C6C7H1260.4°151.6°
C27O6C12H1660.0°30.1°
O6C27H36H37120.0°120.0°
O6C27H36H38120.0°120.0°
O6C27H37H38120.0°120.0°
C7O3C24N2168.3°179.9°
C7O3C24O47.5°0.0°
O3C7C6H1158.8°151.6°
O3C24N2O4175.8°179.9°
O3C24N2H2175.8°0.1°
O3C24N2H34.2°180.0°
C24O3C7H1230.7°30.0°
O2C23N3H5150.3°180.0°
O2C23N3H629.7°0.0°
C23O2C6H1119.2°29.9°
C23N3H5H6180.0°180.0°
C24N2H2H3180.0°179.9°
O4C24N2H20.0°180.0°
O4C24N2H3180.0°0.1°
H4C3C4H7143.7°85.7°
H4C3C4H896.4°154.1°
H7C4C5H962.9°89.4°
H7C4C5H1056.7°30.5°
H8C4C5H9177.3°150.3°
H8C4C5H1063.1°89.7°
H9C5C6H1162.7°83.5°
H10C5C6H11177.6°156.5°
H11C6C7H12178.9°88.4°
H13C9C10H14162.2°160.8°
H14C10C11H15172.7°150.1°
H14C10C26H3360.1°179.9°
H14C10C26H3459.9°59.9°
H14C10C26H35179.9°60.0°
H15C11C12H1672.5°170.9°
H16C12C13H1769.5°9.6°
H16C12C13H18171.2°129.8°
H19C14H20H21120.0°120.0°
H27C22H28H29120.0°120.0°
H30C25H31H32119.9°120.0°
H33C26H34H35120.0°119.9°
H36C27H37H38120.0°120.0°
H39C28H40H41120.0°120.0°

223790

PDB entries from 2024-08-14

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